Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211460g00005 ATGGGAAGTAATATTGTAACAGAAAAAGTGAAGCTTCTTGTGGCATTACTTGCACTGCAATTCTGCTTTGCAGGATTTCACATTGTATCTGGACTTGCACTAAACATTGGTGTTAGCAAAGTGGTTTACCCTGTTTATAGAAATCTAATTGCTTTGATTCTGTTAACCCCATTTGCATATCTATTTGAGAAGAATCAAAGACCACCTCTTACACTGTCTTTATTGGTTCAGTTCTTCCTATTAGCATTATTGGGGATAACTGCAAACCAAGGCTTCTACTTGTTGGGATTATATTATGCTTCTCCAACTTTTGCTTCTGCAATGCAAAACTCAGTTCCTGCTATCACTTTCATCTTGGCCTTAACTTTAAGACTTGAGAAAGTGAACATGGCAAGGAGAAATGGATTAGCAAAAGTTATAGGAACCTTTGCAAGTGTTGGTGGTGCCACCATTATTACTCTATACAAAGGTCCTCCTCTTCTTCACCAAACACATGGAAGCAGAAGCACCTTACAAGGAGATCATAATTCTGAAGAAATGCAGCAAAATTGGAGATGGGGTTGCATATACTTGCTTGGACATTGTTTTTCTTGGGCTGGTTGGATGGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCAGCGAAACTTTCGCTCACGGCATTCACATGTTTCTTCGGATTGATCCAATTCTTGATGATAGCAGCATTTGTAGAAACTGACTTACAAAATTGGAAGATAGTATCATTGCAGGAGCTTTTCCTCATTCTATATGCTGGAATTGTATCATCTGCAATTGTCATTTTTCTCCAAACATGGTGTATCCAAAAGGGTGGACCTGTGTTTGTTGCTGCCTTTCAGCCATTGCAAACAGTCCTAGTAGCTCTCATGGCAGCTTTAATTCTTGGTGATCAGTTATACTCTGGAGGGCTTATTGGTGCAATCCTCATTGTGCTTGGTCTCTACTTAGTCCTATGGGGAAAAACCAGTGAAAAGAACATTTCTGAGTCACCATCATCATTAACAAAGTCCTTGCTGCTCAATGAAGAGGAAGAGATTAAAGTTGATGATGCAGCTTCAAACGACATACCATGA 1092 0.3965 MGSNIVTEKVKLLVALLALQFCFAGFHIVSGLALNIGVSKVVYPVYRNLIALILLTPFAYLFEKNQRPPLTLSLLVQFFLLALLGITANQGFYLLGLYYASPTFASAMQNSVPAITFILALTLRLEKVNMARRNGLAKVIGTFASVGGATIITLYKGPPLLHQTHGSRSTLQGDHNSEEMQQNWRWGCIYLLGHCFSWAGWMVFQAPVVKKYPAKLSLTAFTCFFGLIQFLMIAAFVETDLQNWKIVSLQELFLILYAGIVSSAIVIFLQTWCIQKGGPVFVAAFQPLQTVLVALMAALILGDQLYSGGLIGAILIVLGLYLVLWGKTSEKNISESPSSLTKSLLLNEEEEIKVDDAASNDIP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211460g00005 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 140 - -
Stsc211460g00005 363 Pfam EamA-like transporter family 16 152 IPR000620 GO:0016020
Stsc211460g00005 363 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Stsc211460g00005 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 328 - -
Stsc211460g00005 363 PANTHER WAT1-RELATED PROTEIN 13 336 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211460g00005 Stsc-Chr211460 32553 34201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211460g00005 1 360 Nodulin-like Gene Family AT3G18200 66.393 8.07e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211460g00005 - - mtr:11414658 520.005