Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211460g00004 ATGTTATGTCAGCTGGATTACCACTTGGATGTAAAGGCAGCTAAAAGAGCTATACTTGATGGTTTTCGTAAAACCGACGAGTCTCTTCTTCAAGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCTGTCTGTGTCTGGGTATTGGGACAAAAAGTTTTCGTTGCAAACATAGGAGATGCCAAAGCAGTTTTGGCTCGGTCAACTATAAATGATGGATCCCAGGGTAATTCTGATGGAGCCCATGCACTAAAGGCTATTGTTTTGACAAGAGAGCACAAACCTATCTTCCCACAGGAACGAGCACGCATTCAGAAGGCTGGTGGTGTTGTGAGCTCAAATGGGCGGTTACAAGGGCGTCTAGAAGTTTCTAGGGGTTTTGGAGATCGGCAGTTCAAAAAGGTGGGTTGTATTGCAACCCCGGATATCCATTCTTTTGATCTTACTGAGAGAGAGCATTTCATCATTCTTGGCTGCGATGGCCTGTGGGGTGTATTTGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGGCTGAGTGCTACATCTGTGAGCCGCCGTCTTGTAAGGGAAGCTGTACGTGAGCGTCGCTGCAAAGATAACTGCACCGCAGTTGTTATTGTATTCAAGCATAGTTAA 654 0.4602 MLCQLDYHLDVKAAKRAILDGFRKTDESLLQESAEGGWQDGATAVCVWVLGQKVFVANIGDAKAVLARSTINDGSQGNSDGAHALKAIVLTREHKPIFPQERARIQKAGGVVSSNGRLQGRLEVSRGFGDRQFKKVGCIATPDIHSFDLTEREHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLSATSVSRRLVREAVRERRCKDNCTAVVIVFKHS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211460g00004 217 Pfam Protein phosphatase 2C 13 202 IPR001932 -
Stsc211460g00004 217 SMART PP2C_4 1 212 IPR001932 -
Stsc211460g00004 217 CDD PP2Cc 15 214 IPR001932 -
Stsc211460g00004 217 ProSiteProfiles PPM-type phosphatase domain profile. 1 214 IPR001932 -
Stsc211460g00004 217 SUPERFAMILY PP2C-like 7 215 IPR036457 -
Stsc211460g00004 217 Gene3D - 4 217 IPR036457 -
Stsc211460g00004 217 PANTHER PROTEIN PHOSPHATASE 2C 16 212 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211460g00004 Stsc-Chr211460 26154 30040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211460g00004 9 166 PP2C-type Phosphatase Gene Family AT1G18030 75.316 1.98e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211460g00004 K17500 - pop:7453894 357.836