Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211460g00003 ATGGAGGAAAGCACAGAGGGCAAAACCGTAACGGTGGAACTTGAATCCAAAAAGCGCGAAGCTGATTCGAAAAGCGAGGATCTTGCTGATGTTCCTTCCAAGAAGCCAAAGACGGAAGCTGCTTTCGAAATTGATGCTGATGCAGCTGACGATAAGGGTTCTAGGCTCACAATGGAAGATGCTTGGGTTGTTCTTTCAGACGCAACTTTAGATTACCCTGGAAAATTAAGGTGTGCACATTTTGCAATTTATGATGGGCATGGAGGACGGTTAGCTGCAGAATATGCACAGAAGCATTTGCATGTGAATGTTATGTCAGCTGGATTACCACGTGAGTTGTTGGATGTAAAGGCAGCTAAAAGAGCTATACTTGATGGTTTTCGTAAAACCGACGAGTCTCTTCTTCAAGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCTGTCTGTGTCTGGGTATTGGGACAAAAAGTTTTCGTTGCAAACATAGGAGATGCCAAAGCAGTTTTGGCTCGGTCAACTATAAATGATGGATCCCAGGGTAATTCTGATGGAGCCCATGCACTAAAGGCTATTGTTTTGACAAGAGAGCACAAACCTATCTTCCCACAGGAACGAGCACGCATTCAGAAGGCTGGTGGTGTTGTGAGCTCAAATGGGCGGTTACAAGGGCGTCTAGAAGTTTCTAGGGGTTTTGGAGATCGGCAGTTCAAAAAGGTGGGTTGTATTGCAACCCCGGATATCCATTCTTTTGATCTTACTGAGAGAGAGCATTTCATCATTCTTGGCTGCGATGGCCTGTGGGGTGTATGTTTTCTAGGATCCATCATTGTCTTATTAGTTGTTTTGCTGGTTTGA 861 0.4518 MEESTEGKTVTVELESKKREADSKSEDLADVPSKKPKTEAAFEIDADAADDKGSRLTMEDAWVVLSDATLDYPGKLRCAHFAIYDGHGGRLAAEYAQKHLHVNVMSAGLPRELLDVKAAKRAILDGFRKTDESLLQESAEGGWQDGATAVCVWVLGQKVFVANIGDAKAVLARSTINDGSQGNSDGAHALKAIVLTREHKPIFPQERARIQKAGGVVSSNGRLQGRLEVSRGFGDRQFKKVGCIATPDIHSFDLTEREHFIILGCDGLWGVCFLGSIIVLLVVLLV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211460g00003 286 CDD PP2Cc 44 271 IPR001932 -
Stsc211460g00003 286 PANTHER PROTEIN PHOSPHATASE 2C 29 272 IPR015655 GO:0004722|GO:0006470
Stsc211460g00003 286 SMART PP2C_4 35 286 IPR001932 -
Stsc211460g00003 286 SUPERFAMILY PP2C-like 44 272 IPR036457 -
Stsc211460g00003 286 ProSiteProfiles PPM-type phosphatase domain profile. 45 286 IPR001932 -
Stsc211460g00003 286 Gene3D - 44 277 IPR036457 -
Stsc211460g00003 286 Pfam Protein phosphatase 2C 52 271 IPR001932 -
Stsc211460g00003 286 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211460g00003 Stsc-Chr211460 26154 30040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211460g00003 30 272 PP2C-type Phosphatase Gene Family AT1G18030 73.251 6.26e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211460g00003 K17500 - jre:109016775 414.461