Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211460g00002 ATGGAGGAAAGCACAGAGGGCAAAACCGTAACGGTGGAACTTGAATCCAAAAAGCGCGAAGCTGATTCGAAAAGCGAGGATCTTGCTGATGTTCCTTCCAAGAAGCCAAAGACGGAAGCTGCTTTCGAAATTGATGCTGATGCAGCTGACGATAAGGGTTCTAGGCTCACAATGGAAGATGCTTGGGTTGTTCTTTCAGACGCAACTTTAGATTACCCTGGAAAATTAAGGTGTGCACATTTTGCAATTTATGATGGGCATGGAGGACGGTTAGCTGCAGAATATGCACAGAAGCATTTGCATGTGAATGTTATGTCAGCTGGATTACCACGTGAGTTGTTGGATGTAAAGGCAGCTAAAAGAGCTATACTTGATGGTTTTCGTAAAACCGACGAGTCTCTTCTTCAAGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCTGTCTGTGTCTGGGTATTGGGACAAAAAGTTTTCGTTGCAAACATAGGAGATGCCAAAGCAGTTTTGGCTCGGTCAACTATAAATGATGGATCCCAGGGTAATTCTGATGGAGCCCATGCACTAAAGGCTATTGTTTTGACAAGAGAGCACAAACCTATCTTCCCACAGGAACGAGCACGCATTCAGAAGGTTCAAAATGCTTCAATGATGATTGGCTGGTGGTGTTGTGAGCTCAAATGGGCGGTTACAAGGGCGTCTAGAAGTTTCTAG 717 0.4519 MEESTEGKTVTVELESKKREADSKSEDLADVPSKKPKTEAAFEIDADAADDKGSRLTMEDAWVVLSDATLDYPGKLRCAHFAIYDGHGGRLAAEYAQKHLHVNVMSAGLPRELLDVKAAKRAILDGFRKTDESLLQESAEGGWQDGATAVCVWVLGQKVFVANIGDAKAVLARSTINDGSQGNSDGAHALKAIVLTREHKPIFPQERARIQKVQNASMMIGWWCCELKWAVTRASRSF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211460g00002 238 CDD PP2Cc 44 212 IPR001932 -
Stsc211460g00002 238 PANTHER PROTEIN PHOSPHATASE 2C 29 234 IPR015655 GO:0004722|GO:0006470
Stsc211460g00002 238 SMART PP2C_4 35 234 IPR001932 -
Stsc211460g00002 238 Gene3D - 29 238 IPR036457 -
Stsc211460g00002 238 ProSiteProfiles PPM-type phosphatase domain profile. 45 238 IPR001932 -
Stsc211460g00002 238 SUPERFAMILY PP2C-like 44 223 IPR036457 -
Stsc211460g00002 238 MobiDBLite consensus disorder prediction 1 40 - -
Stsc211460g00002 238 Pfam Protein phosphatase 2C 52 218 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211460g00002 Stsc-Chr211460 26154 30040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211460g00002 30 212 PP2C-type Phosphatase Gene Family AT1G18030 71.585 7.51e-95 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211460g00002 K17500 - jre:109016775 303.908