Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211459g00035 ATGGCTGGGATTTGCTGTGGTGTTGTTGGAGAGGGCGAAACAACGGCTCCGATCGAGCCAACCTCACGGCCCTCCAGGCGAAGGAGCTTAGACATGCTTTCTTTGAGGTTAATGACCGACGTGGCTTCGGCGACGCCTCATGACGCTTCCCGGAAACGCCAGAGGATGGATCTCTGCGCAGTTCCCAGGGAGTGCGACAACGCCGTGGAGAACCGCAACTCCTTTGGTGTTGCCGGCCAGAGCAAGAACGAAGGATCTAACCAGGTGGTTAACCACGAAGACGGCATAGTTTCGGAACCGAAACGGTCCGAGGTTCCTTCTCTGTTGAGTATGACGGCGGAAGTTTTGAGAAATGAGGAGGTTGTTGAAGAGTATCCGAAGTTCGGCGTGACGTCCGTTTGTGGAAGGAGACGAGACATGGAAGATTCAGTTTGTGTGCGTCCTTCCTTCTGCTATGAGAGTCACAGAGGGTTCCATTACTTCGGCGTCTTTGACGGTCACGGTTGCTCACATGTTGCGACGATGTGCAAGGAAAAGCTGCATGATATTGTGAAGGATGAGATCAGAGGAGCGAAGAAGGATGAACAAGAGTTGGAATGGAAATCGATGATGGAGAAAGGTTTTTCACGCATGGATGACGAGGTACAGAGCTGGAGCCAGGGGAATCACTCCTCCGCCTGCCGCTGCGAGCTTCAGACTCCACACTGCGACGCCGTCGGATCCACCGCCGCCGTCGCCGTCGTCACCCCCGACAAGATCGTCGTCTCGAACTGCGGCGACTCACGAGCAGTCCTCTGCCGTAAGGGCAGGGCCATCCCCCTCTCCTCCGATCACAAGCCTGACCGACCCGACGAACTGCTCCGGGTTCAAGCAGCAGGAGGGCGCGTGATCTATTGGGATGTTCCCAGGGTGCTTGGGATGCTAGCCATGTCTAGAGCCATAGGGGATAATTATCTGAAACCGTACGTGATCTCGGAACCGGAGGTTACCGTGACGGAGAGGAGTGACGATGATGAGTGTTTGATTATTGCAAGTGACGGTTTGTGGGACGTGGTGTCAAATGACACCGCGTGCGGGGTGGTGAGGATGTGTCTCAAGGCTCAGAAGCCACCGTCGCCGCCGGGGTCACCGTCTGGGAGTGAGGTGGCGGCGGACGGATCCGATAGGGCGTGCTCAGATGCTTCGATTCTGCTGACTAAGTTGGCGCTGGCGAGGCACAGCGAGGATAATGTGAGCGTGGTGGTGGTTGACTTGAGGAGGGACCGATCGACAACGGTCTGA 1281 0.5636 MAGICCGVVGEGETTAPIEPTSRPSRRRSLDMLSLRLMTDVASATPHDASRKRQRMDLCAVPRECDNAVENRNSFGVAGQSKNEGSNQVVNHEDGIVSEPKRSEVPSLLSMTAEVLRNEEVVEEYPKFGVTSVCGRRRDMEDSVCVRPSFCYESHRGFHYFGVFDGHGCSHVATMCKEKLHDIVKDEIRGAKKDEQELEWKSMMEKGFSRMDDEVQSWSQGNHSSACRCELQTPHCDAVGSTAAVAVVTPDKIVVSNCGDSRAVLCRKGRAIPLSSDHKPDRPDELLRVQAAGGRVIYWDVPRVLGMLAMSRAIGDNYLKPYVISEPEVTVTERSDDDECLIIASDGLWDVVSNDTACGVVRMCLKAQKPPSPPGSPSGSEVAADGSDRACSDASILLTKLALARHSEDNVSVVVVDLRRDRSTTV 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211459g00035 426 ProSiteProfiles PPM-type phosphatase domain profile. 127 418 IPR001932 -
Stsc211459g00035 426 PANTHER PROTEIN PHOSPHATASE 88 418 IPR015655 GO:0004722|GO:0006470
Stsc211459g00035 426 SMART PP2C_SIG_2 142 418 IPR001932 -
Stsc211459g00035 426 FunFam Protein phosphatase 2C 37 122 425 - -
Stsc211459g00035 426 Pfam Protein phosphatase 2C 128 395 IPR001932 -
Stsc211459g00035 426 ProSitePatterns PPM-type phosphatase domain signature. 160 168 IPR000222 GO:0043169
Stsc211459g00035 426 CDD PP2Cc 127 418 IPR001932 -
Stsc211459g00035 426 Gene3D - 121 425 IPR036457 -
Stsc211459g00035 426 SMART PP2C_4 115 416 IPR001932 -
Stsc211459g00035 426 SUPERFAMILY PP2C-like 125 419 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211459g00035 Stsc-Chr211459 247782 250170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211459g00035 1 424 PP2C-type Phosphatase Gene Family AT3G11410 54.273 9.30e-139 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211459g00035 K14497 - gmx:100776356 528.094