Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211459g00025 ATGAAGGCCCTGATTCTGGTTGGGGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCTAAGCCTCTTGTTGATTTTGCTAACAAACCTATGATTCTACATCAGATTGAAGCCCTTAAGGCTGTTGGAGTCAGTGAAGTGGTACTAGCTATCAATTACCAACCAGAGGTAATGTTAAATTTCCTGAAGGATTTTGAAGCAAAGCTCGACATCAAGATCACTTGTTCTCAAGAAACTGAACCAATGGGGACAGCTGGCCCCTTGGCTCTTGCCAGAGATAAGTTGATAGATGAATCTGGAGATCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTATCCACTCAAAGATATGATCAAATTCCACAAAGCCCATGGAGGAGAGGCTTCCATAATGGTGACAAAGGTGGATGAACCATCCAAATATGGTGTGGTTGTTATGGAGGACACCACTGGCCAGGTTGAGAAATTTGTAGAAAAACCAAAGTTGTTTGTTGGTAATAAAATCAATGCTGGAATCTACCTATTGAACCCCTCAGTTTTAAACCGAATAGAACTGAGGCCCACTTCAATTGAGAAAGAGGTGTTTCCAAAGATTGCAGAAGAGAAAAAGCTCTATGCAATGGTTCTTCCGGGATTCTGGATGGACATTGGAATGCCAAAGGACTACATTACCGGCTTGAGACTCTACTTGGACTCGTTAAGGAAAAAGACTCCTTCTAAGTTGGCTGCTGGTTCCAACATTGTGGGGAATGTCATTGTGGATGAGACTGCCAAAGTCGGCGAGGGATGCCTCATTGGACCTGACGTTGCTATTGGCCCCGGATGCATTATTGAGTCAGGTGTCAGGCTCTCAAACTGCACAATAATGCGAGGAGTTCGCGTCAGAAATCATGCTTGTATATCAAGCAGCATCATTGGATGGCATTGCACTGTTGGGCAATGGGCTCGTTTGGAGAACATGAGTGTCCTTGGAGAAGATGTTCATGTATCCGATGAAATTTACACCAATGGTTGCCTGATTTTGCCTCACAAGGAGATCAAGTCAAGCCTTGTGACACCAGAGATAGTCATGTGA 1086 0.4401 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAVGVSEVVLAINYQPEVMLNFLKDFEAKLDIKITCSQETEPMGTAGPLALARDKLIDESGDPFFVLNSDVISEYPLKDMIKFHKAHGGEASIMVTKVDEPSKYGVVVMEDTTGQVEKFVEKPKLFVGNKINAGIYLLNPSVLNRIELRPTSIEKEVFPKIAEEKKLYAMVLPGFWMDIGMPKDYITGLRLYLDSLRKKTPSKLAAGSNIVGNVIVDETAKVGEGCLIGPDVAIGPGCIIESGVRLSNCTIMRGVRVRNHACISSSIIGWHCTVGQWARLENMSVLGEDVHVSDEIYTNGCLILPHKEIKSSLVTPEIVM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211459g00025 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 360 - -
Stsc211459g00025 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 313 IPR029044 -
Stsc211459g00025 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 233 IPR029044 -
Stsc211459g00025 361 Gene3D Hexapeptide repeat proteins 236 359 - -
Stsc211459g00025 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058
Stsc211459g00025 361 FunFam mannose-1-phosphate guanyltransferase beta 1 232 - -
Stsc211459g00025 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211459g00025 Stsc-Chr211459 186423 189996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211459g00025 1 147 Eukaryotic Initiation Factors Gene Family AT4G18300 24.516 2.03e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211459g00025 K00966 - sind:105160944 657.136