Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211459g00024 ATGGGTCAGAAGCAGCACAATAATACAGATCCCAACATCGAAACCAAGAAGCGACGCCGCGTTGGCTTCTCCGCCGTAGACGACGGTGTTGAAGCCAAGCACTGCATCAAAATCTTCCTAGTGTCAAACAAAGAGGAATTCCTGGCTCCAGAGAGTTCAGCCATTGAACCTGTGGATTTGAATGCCTTTTTTGGTGATGATGGGAAAATATATGGATACGAGGGGTTGAAGATTAATGTCTGGGTTAGTAGCATATCGTTTCGTGCATATGCTGATATTACCTTCGAAAGTTCATCTGATAATATTTTTGCTGAGACTCTTGTTGAGAGCAAAGAAGAATTCCTTCAAACTTTTATTGCAGATAAGGATTTTATTAGAACAACTATCTCAAGTGGTGAGGTTTTGCAGAAGAAAGTTTTTAATGGGCAGATCAATGGTTCTAACGCGGATGCAGATTCAGCTACATCTAAAGTTGAGGTTGTTCGAATGGTGGTAGGCAGCATGGCTACTGGGCACCTTTACAGTCGCCTAATACCCCTTGTTCTTCTTCTTGTGGATGGTAGCAGTCCAATTGATGTTACGGATCCACACTGGGAGTTGTATCTTGTAATCCAGAATGAAACTGATCAACAGGGAGAGATCCAATGTAGGTTGATTGGTTTTGCTGCTACCTATCGATTTTACCACTATCCTGGTGGTACCCGATTGCGACTTAGCCAGATACTTGTACTGCCTAGTTACCAGCACAAAGGCTATGGTCGACATATCCTTGAAGTGCTAAATGATGTTGCCATATCTGAAAATGTCTTTGACATTACAATTGAAGAGCCGTTAGATCACTTGCAACACATCCGCACATGTGTTGATATACTTCGCCTGCTTCCTTGTGAACCAATACAGCAGTCAGTAAAGGCTGCTGTCTCACTACTAAAGCAAGGAAGACTATCAAAGAAGACTAATCGTCCGCGACTAATGCCACCTTCCAGTGCTATTGAGTATGCCAGGAAAAATCTGAAAATTAACAAGAAGCAGTTTCTCCAATGTTGGGAGATTTTGCTCTACCTTGGCCTTAATCCTGTTGAAAAGCACATGGATAACTTTTTGAGCATCATCTGCAACCGTGTAAAGTATGACATCTTAGGGAAAGATTCTGGCACTTCTGGGAAGCAACTTATTGAAGTTCCTACTGAATTTTCCGAGGAGATGTCATTTGTCATGTTCAAATCGGGAGTGAACGAAGATAATACTACTGTGCAGGTGGATGACAGTCAGCCAAATCAAGAAGAGCAATTGCAGAAGTTGGTCCAAGAAAGGGTGAAAGAGATACAGTTGATTGCGGAGAAGGTATCCCTGCATCGCGAGGGCTCAGTTGTTGCTGTAAATTGA 1386 0.4264 MGQKQHNNTDPNIETKKRRRVGFSAVDDGVEAKHCIKIFLVSNKEEFLAPESSAIEPVDLNAFFGDDGKIYGYEGLKINVWVSSISFRAYADITFESSSDNIFAETLVESKEEFLQTFIADKDFIRTTISSGEVLQKKVFNGQINGSNADADSATSKVEVVRMVVGSMATGHLYSRLIPLVLLLVDGSSPIDVTDPHWELYLVIQNETDQQGEIQCRLIGFAATYRFYHYPGGTRLRLSQILVLPSYQHKGYGRHILEVLNDVAISENVFDITIEEPLDHLQHIRTCVDILRLLPCEPIQQSVKAAVSLLKQGRLSKKTNRPRLMPPSSAIEYARKNLKINKKQFLQCWEILLYLGLNPVEKHMDNFLSIICNRVKYDILGKDSGTSGKQLIEVPTEFSEEMSFVMFKSGVNEDNTTVQVDDSQPNQEEQLQKLVQERVKEIQLIAEKVSLHREGSVVAVN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211459g00024 461 Gene3D - 138 285 - -
Stsc211459g00024 461 FunFam Histone acetyltransferase type B catalytic subunit 174 285 - -
Stsc211459g00024 461 Pfam Acetyltransferase (GNAT) family 213 269 IPR000182 GO:0016747
Stsc211459g00024 461 Gene3D - 33 186 IPR037113 GO:0006325
Stsc211459g00024 461 Pfam Histone acetyl transferase HAT1 N-terminus 30 186 IPR019467 GO:0006325
Stsc211459g00024 461 CDD NAT_SF 213 275 - -
Stsc211459g00024 461 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 29 355 IPR016181 -
Stsc211459g00024 461 PANTHER HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT 5 450 IPR017380 GO:0004402|GO:0005634|GO:0016573|GO:0031509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211459g00024 Stsc-Chr211459 183297 185899 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc211459g00024 Hat1_N 2.7e-18 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211459g00024 K11303 - gmx:100820418 657.907