Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211458g00010 ATGTATTCTTTCTTATCTTTACTCTTCTCCTTTGCCGCCATAGCCGGCGGTCTCATCCTCTTCCGGCGGTGGCGCTACCGCCGTCTCAACCTCCCTCCGGGGAGCCTTGGCCTCCCCTTCATCGGCGAGACTCTTCAGCTAATCTCTTTATACAAGACTGACAACCCGGAGCCGTTCATGGACGAGAGAATGAAACGGTACGGTCCGATCTTCATGACTCACGTTTTCGGCGAAGCGACGGTGTTTTCGGCTGACCCGGACACGAACCGGTTCATTCTGGCGAACGAAGGGAAGCTGTTCGAGATAAGTTACCCCGGTTCGATATCGAACCTTTTGGGGAAGCACTCGTTGTTGCTGATGAAGGGGAATCTACACAAGAGGATGCACTCAATGACAATGAGTTTTGCGAGTTCTACGATCCTAAAGGATCATCTTTTGGCTGATGCGGACCGCCTCATACAGCTCAGCATGGATTCTTGGTCCAACCGGGTTCTACTCTTGGAACAAGCCAAGAAGATAACATTTGATTTGACAACGAAACAACTAATGAGCTTTGATCCAGACGAATGGACTGAGAGTCTAAGGAAACACTACGTTCTGGTGATTGAAGGATTCTTCGCTATTCCCTTCACTCTCTTCTCAACTACCTACCGTAGGGCCATCAAGGCAAGAACAAAAGTGGTGGAGGCACTAACTCCGGTAGTGAGGGAGAGAAGAAAACGAAGTGAAATTGATGGGGAGAGAAAGAAGGACATGCTTGGGGCAATGCTGGCCTCCGGAGACCAATTCTCCGACGATGAAATAGTCGATTTTCTGTTGGCTTTGATCGTCGGCGGCTATGAAACCACCTCCACCATCATGACTCTTGCTATCAAGTTCCTCACTGATACTCCTCTTGCCTTGGCTCAGCTTAAGGAAGAGCATGACCAAATCAGATCAAGGAGTAAACCCGGTGCCCCACTTGAATGGGCAGATTACAAGTCAATGATCTTTACTCAATGCGTTGTGAATGAGACCTTAAGGATGGCCAACATAATTGGTGGAATATTCAGGAGAACAACCACTGACATAAATATAAATGGTTACACCATTCCAAAGGGATGGAAGGTATTTGCATCACTTCGTGCTGTACATCTCAACCCAGACCATTTCAAAGATGCACGCACCTTCAATCCATGGAGATGGCAGAATAAATCAGAGACAACGGTCCCTGGAAATGTATACGCACCGTTTGGAGGAGGGCCAAGGCTGTGCCCTGGCTATGAGCTCGCTAGGGTTGTTCTTTCTGTCTTCCTTCACCGCATTGTCACCACATTCAGCTGGGTACCTGCTGAGGAAGATAAGTTGGTGTTCTTCCCAACAACAAGGACGCAAAAGAGGCTTCCACTCATAGTGAAGCGTAGGGAGGAGTCAAGTCATTGTATATAG 1428 0.4832 MYSFLSLLFSFAAIAGGLILFRRWRYRRLNLPPGSLGLPFIGETLQLISLYKTDNPEPFMDERMKRYGPIFMTHVFGEATVFSADPDTNRFILANEGKLFEISYPGSISNLLGKHSLLLMKGNLHKRMHSMTMSFASSTILKDHLLADADRLIQLSMDSWSNRVLLLEQAKKITFDLTTKQLMSFDPDEWTESLRKHYVLVIEGFFAIPFTLFSTTYRRAIKARTKVVEALTPVVRERRKRSEIDGERKKDMLGAMLASGDQFSDDEIVDFLLALIVGGYETTSTIMTLAIKFLTDTPLALAQLKEEHDQIRSRSKPGAPLEWADYKSMIFTQCVVNETLRMANIIGGIFRRTTTDININGYTIPKGWKVFASLRAVHLNPDHFKDARTFNPWRWQNKSETTVPGNVYAPFGGGPRLCPGYELARVVLSVFLHRIVTTFSWVPAEEDKLVFFPTTRTQKRLPLIVKRREESSHCI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211458g00010 475 SUPERFAMILY Cytochrome P450 23 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 FunFam Cytochrome P450 90A1 21 468 - -
Stsc211458g00010 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Stsc211458g00010 475 CDD CYP90-like 63 467 - -
Stsc211458g00010 475 PANTHER CYTOCHROME P450 26 28 442 - -
Stsc211458g00010 475 Gene3D Cytochrome P450 22 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211458g00010 475 Pfam Cytochrome P450 32 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211458g00010 Stsc-Chr211458 108612 116904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211458g00010 120 469 Cytochrome P450 AT5G05690 74.571 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211458g00010 K09588 - gmx:100781291 754.977