Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211458g00008 ATGGCCAACGCCGGCGCTGCCGCCACGTCATACTTCTTTGGCACACGCCTCACAACCCCTACACCATCTTCTGGAAGGTTCCAAGCCTTCTTCAACCTCGGAACCAAGAAGGCACCGCCATCGCCGCCACAGAAGAAGAAGGAGCCTGCGAAGCCGGCAAAGTCCGCGAAGCCAGCATTCTCCTCCGGGGACCGTCTCGTGTGGTTCCCGGGGGCACAGCCACCGGAATGGCTGGACGGATCAATGATCGGAGACCGTGGATTCGATCCATTTGGGCTTGCAAAGCCCGCAGAGTACCTTCAGTATGACTTGGACTCGCTTGACCAGAACCTAGCCAAGAACGAGTATGGAGAGATCATCGGAACAAGGATCGAAACGACGGATGTGCAACCCACACCTTTTCAGCCGTACAACGAGGTTTTTGGAATTCAGAGATTCCGGGAGTGTGAAGTCATTCACGGAAGGTGGGCCATGCTTGGTGCTCTTGGTGCTTTGGCCGTTGAAGCTCTCACTGGTGTTGCGTGGCAAGACGCCGGCAAGGTGGAGCTAGTGGAAGGAGCATCATACTTGGGACTGCCACTTCCATTCTCACTGACAACACTGATATGGATTGAAGTGTTAGTGATTGGGTACATTGAGTTCCAAAGAAATGCAGAGCTTGACCCAGAGAAGAGGATATACCCTGGTGGCAAGTTCTTTGACCCGTTGGGATTGGCAAATGACCCTGAAGAGAAGGCAAGGCTTCAACTTGCTGAGATCAAGCACTCTCGTTTGGCCATGGTTGTCTTTCTCATCTTTGCTATTCAAGCTGCTACAACTGGCAAAGGCCCTATCAGTTTCATTGCTACCTTCAACAAGTGA 861 0.5273 MANAGAAATSYFFGTRLTTPTPSSGRFQAFFNLGTKKAPPSPPQKKKEPAKPAKSAKPAFSSGDRLVWFPGAQPPEWLDGSMIGDRGFDPFGLAKPAEYLQYDLDSLDQNLAKNEYGEIIGTRIETTDVQPTPFQPYNEVFGIQRFRECEVIHGRWAMLGALGALAVEALTGVAWQDAGKVELVEGASYLGLPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRIYPGGKFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFLIFAIQAATTGKGPISFIATFNK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211458g00008 286 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 44 282 IPR001344 GO:0009765|GO:0016020
Stsc211458g00008 286 Pfam Chlorophyll A-B binding protein 74 270 IPR022796 -
Stsc211458g00008 286 SUPERFAMILY Chlorophyll a-b binding protein 61 283 - -
Stsc211458g00008 286 Gene3D Chlorophyll a/b binding protein domain 67 286 - -
Stsc211458g00008 286 MobiDBLite consensus disorder prediction 33 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211458g00008 Stsc-Chr211458 69218 72010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211458g00008 12 283 Chloroplast and Mitochondria Gene Families AT3G08940 70.330 1.94e-135 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211458g00008 K08915 - gmx:100820335 437.958