Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211457g00014 ATGGGCGAGCGTATTGGGCTTGGATCATATGGGGAAGTGTACCACGGTGATTGGCATGGAACTGAAGTTGCTGTAAAGAGGTTTTTAGATCAAGATATCTCTGGTGAATTACTTGAAGAGTTCAAAAGTGAGGTCCAAATAATGAAGAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACGCGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCTAGAGGGAGTTTGTATAGGTTAATTCATCGACCTAACAATCAACTAGATGAGCGAAGGCGGTTGAGGATGGCCCTAGATGCTGCTCGCGGAATGAACTATTTGCACAACTGCACTCCAGTAATAGTGCATCGTGATTTGAAGTCCCCTAATCTTCTTGTAGACAAAAACTGGGTTGTAAAGGTTTGTGATTTTGGCTTATCGCGAATAAAGCATAGCACATTCCTTTCTTCCAGATCAACTGCAGGAACGGCTGAGTGGATGGCTCCAGAAGTCTTAAGAAATGAGCTTTCTAATGAAAAGTGTGATGTTTATAGCTTTGGGGTTATATTGTGGGAGCTCTCTACTCTGCAGCAACCATGGGGAGGGATGAATCCGATGCAAGTTGTTGGTGCTGTTGGTTTCCAACATCGGCGTCTTGACATTCCAGATGATGTGGACCCTGCAGTTGCAGATATTATAAGGCAATGCTGGCAGACAGATCCAAAGTTGAGACCCACATTTGCCGAAATCATGGCTGCTTTGAAGCCATTGCAGAAGCCCATTACTAGTTCTCAAGTGCTAAGAACAAGTGCTCAGTCATCTAGAGTTGCCGAAGACCCCGCAAGATAG 840 0.4429 MGERIGLGSYGEVYHGDWHGTEVAVKRFLDQDISGELLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRIKHSTFLSSRSTAGTAEWMAPEVLRNELSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPAVADIIRQCWQTDPKLRPTFAEIMAALKPLQKPITSSQVLRTSAQSSRVAEDPAR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211457g00014 279 Gene3D Phosphorylase Kinase; domain 1 1 76 - -
Stsc211457g00014 279 SMART serkin_6 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211457g00014 279 FunFam Serine/threonine-protein kinase CTR1 78 261 - -
Stsc211457g00014 279 PIRSF ILK 1 271 - -
Stsc211457g00014 279 ProSiteProfiles Protein kinase domain profile. 1 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211457g00014 279 CDD STKc_MAP3K-like 5 251 - -
Stsc211457g00014 279 Gene3D Transferase(Phosphotransferase) domain 1 78 263 - -
Stsc211457g00014 279 ProSitePatterns Protein kinases ATP-binding region signature. 5 26 IPR017441 GO:0005524
Stsc211457g00014 279 SUPERFAMILY Protein kinase-like (PK-like) 2 261 IPR011009 -
Stsc211457g00014 279 FunFam Serine/threonine-protein kinase isoform 1 1 77 - -
Stsc211457g00014 279 PRINTS Tyrosine kinase catalytic domain signature 73 86 IPR001245 GO:0004672|GO:0006468
Stsc211457g00014 279 PRINTS Tyrosine kinase catalytic domain signature 112 130 IPR001245 GO:0004672|GO:0006468
Stsc211457g00014 279 PRINTS Tyrosine kinase catalytic domain signature 222 244 IPR001245 GO:0004672|GO:0006468
Stsc211457g00014 279 PRINTS Tyrosine kinase catalytic domain signature 178 200 IPR001245 GO:0004672|GO:0006468
Stsc211457g00014 279 PRINTS Tyrosine kinase catalytic domain signature 159 169 IPR001245 GO:0004672|GO:0006468
Stsc211457g00014 279 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 2 261 - -
Stsc211457g00014 279 Pfam Protein tyrosine and serine/threonine kinase 2 251 IPR001245 GO:0004672|GO:0006468
Stsc211457g00014 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 118 130 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211457g00014 Stsc-Chr211457 79536 83301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211457g00014 1 273 MAP Kinase Kinase Kinase AT1G73660 84.615 6.04e-172 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Stsc211457g00014 PK_Tyr_Ser-Thr 5.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211457g00014 - - gmx:100778331 519.235