Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211457g00012 ATGAAAGCGCAAAAGGCAGGGAAAGAAGAATCTCAGCCAAAGTTCTTGCCTATGGTTAGAAGAGGCCTTGGAACCAAGGGACCGAAGATTCAGCTGCAAAGTAACCATTTCAGAGTTCGAGTGGGCATAAAAGATGGTTTCTTCTATCATTATAGTGTTGCAATGTCTTATGAGGATGGAAATCCGGTTGAAGCTAAGGGAATTGGCCGAAAGGTCATTGACAAAGTTTATGAAACATATGATGAATTGAAAAGCAAGAACTTTGCATATGATGGTGAGAAAAGCTTATTCACTCTTGGCTCTCTTAAAGAGAACAAGATGGAGTTCACTGTTGTGCTGGAGGATCTTACATCAAGGAGGGCTGGAAGGAGTGATGCTGGCCTTGATAGCCCTACAGATGGAGAGAAAAAGAGAATGAGGCGCCAATCTCAGTCCAAGAATATCAAGGTGGTGATCAGTTATCCAGGAAGCATTGAGGGTCCTTGA 486 0.43 MKAQKAGKEESQPKFLPMVRRGLGTKGPKIQLQSNHFRVRVGIKDGFFYHYSVAMSYEDGNPVEAKGIGRKVIDKVYETYDELKSKNFAYDGEKSLFTLGSLKENKMEFTVVLEDLTSRRAGRSDAGLDSPTDGEKKRMRRQSQSKNIKVVISYPGSIEGP 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211457g00012 161 Pfam N-terminal domain of argonaute 29 158 IPR032474 -
Stsc211457g00012 161 MobiDBLite consensus disorder prediction 121 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211457g00012 Stsc-Chr211457 68734 69416 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211457g00012 16 115 Eukaryotic Initiation Factors Gene Family AT1G48410 36.275 1.90e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211457g00012 K11593 - qsa:O6P43_029783 183.341