Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211456g00033 ATGGATTACATGAGGGATGCTTGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAACCCAAGTTATGGTAGTATTCCGGAGACGTCTTCAACGCATCACATGCAAATGATTCCGCCACCTGAGTTGTCCGTAAAGGAAGAAAGGCAGGTGGAAGAAGTGCCTGTTGTTGAGAAACCAAACAGCACTGGGAAGAAGAGACAGGGTCCCAAGGTGCCAAAATCTCCCAAGGCAAAGAAGCCCAAAAGGGGGCCTCGCGTGCCTAAGGATGAGAATGCTCCTACAGTTCAACGAGCTAGGGCTCCAAAGAAAACTACTGAAATTGTGATAAATGGGGTCGACTTGGATATTTCGAGTATTCCAATTCCTGTTTGTTCGTGCACTGGGTCACCTCAACAGTGCTACCGATGGGGCTCGGGTGGGTGGCAGTCTGCATGTTGTACAACGGGAATGTCTACTTATCCTTTGCCAATGAGTACAAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCTGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTACTGGGCAAAACATGGCACCAATAAGTTTGTCACTATCAGGTAG 651 0.4547 MDYMRDAWISSQREKYMNMIPTNPSYGSIPETSSTHHMQMIPPPELSVKEERQVEEVPVVEKPNSTGKKRQGPKVPKSPKAKKPKRGPRVPKDENAPTVQRARAPKKTTEIVINGVDLDISSIPIPVCSCTGSPQQCYRWGSGGWQSACCTTGMSTYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211456g00033 216 PANTHER - 10 216 IPR010409 -
Stsc211456g00033 216 SMART GAGA_bind_2 1 216 IPR010409 -
Stsc211456g00033 216 Pfam GAGA binding protein-like family 1 216 IPR010409 -
Stsc211456g00033 216 MobiDBLite consensus disorder prediction 21 40 - -
Stsc211456g00033 216 MobiDBLite consensus disorder prediction 21 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211456g00033 Stsc-Chr211456 298995 300005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211456g00033 4 216 BBR or BPC Transcription factor family AT2G01930 54.222 2.13e-77 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Stsc211456g00033 GAGA_bind 3.6e-96 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211456g00033 - - gmx:100784091 362.459