Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211456g00028 ATGGATTCAAAGACGCCCCAACGGCGTCGTTCAGGAAGTGAAATCCACAATGGCACCATTACCAGAGAGAAGAAGCCCAAACGCAGCGAGGTCCTCGCAAAGAAGAAAGCCGTTGAGCAAGCCATCAAATCAGCACGTGCGGAAAAGGATCACCTCGCTTCCTTCCCTGAGTTCCGCCACTTCGTCAATAACGGTCTATCTATGTATTTGAAGTCAGGACGTGGTGATAAACTATCTTCTCCTGTTAAGCACTATGTTCAGAGTCTCCTTAAGCTAAACATGGAAGGACCCTATGGATCTGAGTGGTTGGACGAAGAAAAGGTTAAGCGCAGAGAAATGGTTGCTCCAGAAGCACACTATATATTTGTGCATGAGGTTGCGGACTCAGTTGGTGATGAGACGGGAACGATGTTGAGTGCAGAAGAGGCTTCAACTTGTTGTGTAGAAGATAGTGGCCCCTTGGTTGGATTTGTACATTACCGTTTTGTTCTAGAAGAAGATATACCGGTCCTTTATGTGTATGAGCTGCAGATTGAGCCTCGTGTTCAGGGAAAAGGATTAGGGAAGTTCCTAATGCAACTAATTGAGCTTATTGCCCAAAAGAACTGCATGGGTGCTGCCATACTAACTGTTCAGAAAGCAAACTTATTAGCTCTGAATTTCTATCTAAGTAAGCTGAGATACATCATATCAACCATTTCCCCTTCAAAGATGGGGATTGAGAAGAGTTATGAAATTCTTTGCAAAACATTTAATGACGAAGCTAAAACTATTCTGGAGGTACAGCTCCAAACCACACCATTAGATTGA 810 0.4383 MDSKTPQRRRSGSEIHNGTITREKKPKRSEVLAKKKAVEQAIKSARAEKDHLASFPEFRHFVNNGLSMYLKSGRGDKLSSPVKHYVQSLLKLNMEGPYGSEWLDEEKVKRREMVAPEAHYIFVHEVADSVGDETGTMLSAEEASTCCVEDSGPLVGFVHYRFVLEEDIPVLYVYELQIEPRVQGKGLGKFLMQLIELIAQKNCMGAAILTVQKANLLALNFYLSKLRYIISTISPSKMGIEKSYEILCKTFNDEAKTILEVQLQTTPLD 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211456g00028 269 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 106 259 IPR000182 GO:0016747
Stsc211456g00028 269 PANTHER N-ALPHA-ACETYLTRANSFERASE 40 22 264 IPR039949 GO:0010485|GO:0043998
Stsc211456g00028 269 CDD NAT_SF 148 211 - -
Stsc211456g00028 269 Gene3D - 62 254 - -
Stsc211456g00028 269 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 141 224 IPR016181 -
Stsc211456g00028 269 Coils Coil 28 48 - -
Stsc211456g00028 269 MobiDBLite consensus disorder prediction 1 35 - -
Stsc211456g00028 269 Pfam Acetyltransferase (GNAT) family 138 222 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211456g00028 Stsc-Chr211456 244439 246606 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc211456g00028 Acetyltransf_1 1.3e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211456g00028 K20794 - gmx:100500318 338.961