Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211456g00015 ATGGGTGAGAATGTGATTCCTGATCTATCACTGAACATTAGCCTGCCATACACAAAGAGTGCTCCATCTTCAATATGCAATAATAACAATAATGAAGAAGGGGATAATTCTTGTGGAGGATTTGATATATGGAGAAGTAGCAGCGAAGAAGGAGGACTCAAATCACACAGTGATGGTTCTGCTTCCATTTCAATCCCTCATCAGACACAACTCTCTTTATTATCCACAACCACTACTACCCCTTCTGAAGCTGAAAGCCCTTGGAGAATTACAACACCACCCCAAACAAATCATCTTCATCATGATGCTCTTGGTTTTGGTGTTGTTGGGGTTTCATCTTCATCATCAGAGGAAATAGCAGTAATTAGGCCTATGATCAATGGAGTCCCTCTTTACAACAACAAGTTTTCTTCTTCTCCACTTTCAAGGTTTAATGCTATAACCATGGAGAATCTAAGAACCCTTAATAATCATCATCACCATCAGTTATTTGGGGTTACTGGGGGGAACAACAACAACAACAACAACTGCGGTTGTGATTTAACAAACGGGTTTTTGATGAGGTCATCAAGAATGTTTCCATCATCGACAACCATGATGCATAGCAGCAAGAGGAACATGAGGGCTCCAAGAATGCGCTGGACAACCTCCCTCCATGCTCGATTTGTTCATGCTGTTGAGCTCCTTGGCGGCCATGAAACTTTTGGATTAATAGGGGCTACTCCAAAGTCAGTTCTGGAGCTCATGGATGTCAAAGATCTAACACTGGCTCATGTCAAGAGTCACTTGCAGATGTATAGAACTGTTAAGAATACTGACAAGCCAGCAACTTCATCAGATGCAGATGAAGATTTCATGTCCCTAGCAGCATCACCATTTAGTCAAAATAAGAACTTTTCACCAAATCAAAGAGGGCCCCCATCATCAAATAATGCATCTCTAGATCAAGATTTGGGATACAACACCACTACTACTACTACTTGCGGCAATAATCTATGGGGTAATTCTTCTTCCAGTAGAGGAGCATGGATACAAGCCAATGAGTTTAGTCCAGAAACCCTATCATCTTCTCAGCACATAATTGGGAAGCTCTCCAAGCAGGGAAGCAACAACCATATACAATCAAGAAGCTTCAAGGATCAAAATAATTTAGATTGTCATCATCAGAATCCAAGCTTGGAATTCACCTTAGGGAGATGA 1200 0.4125 MGENVIPDLSLNISLPYTKSAPSSICNNNNNEEGDNSCGGFDIWRSSSEEGGLKSHSDGSASISIPHQTQLSLLSTTTTTPSEAESPWRITTPPQTNHLHHDALGFGVVGVSSSSSEEIAVIRPMINGVPLYNNKFSSSPLSRFNAITMENLRTLNNHHHHQLFGVTGGNNNNNNNCGCDLTNGFLMRSSRMFPSSTTMMHSSKRNMRAPRMRWTTSLHARFVHAVELLGGHETFGLIGATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPATSSDADEDFMSLAASPFSQNKNFSPNQRGPPSSNNASLDQDLGYNTTTTTTCGNNLWGNSSSSRGAWIQANEFSPETLSSSQHIIGKLSKQGSNNHIQSRSFKDQNNLDCHHQNPSLEFTLGR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211456g00015 399 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 7 399 IPR044847 GO:0000976|GO:0006355|GO:0010158
Stsc211456g00015 399 Gene3D - 209 271 - -
Stsc211456g00015 399 MobiDBLite consensus disorder prediction 368 390 - -
Stsc211456g00015 399 MobiDBLite consensus disorder prediction 53 90 - -
Stsc211456g00015 399 MobiDBLite consensus disorder prediction 49 90 - -
Stsc211456g00015 399 MobiDBLite consensus disorder prediction 292 321 - -
Stsc211456g00015 399 NCBIfam myb-like DNA-binding domain, SHAQKYF class 210 268 IPR006447 GO:0003677
Stsc211456g00015 399 SUPERFAMILY Homeodomain-like 207 269 IPR009057 -
Stsc211456g00015 399 FunFam Myb family transcription factor 208 271 - -
Stsc211456g00015 399 MobiDBLite consensus disorder prediction 368 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211456g00015 Stsc-Chr211456 135956 145482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211456g00015 125 399 G2-like Transcription Factor Family AT5G16560 42.160 8.07e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc211456g00015 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211456g00015 - - aip:107644092 468.003