Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211455g00045 ATGGCAGCAAGCACTGGTAGCATTCCATCTCACATAAAAGCTTGGGTGTACAATGAATATGGGAACATTGAAGACACTCTCAAGCTTGACTCCAACATAGCTATACCAGAAATTAAGGATGACCAGGTTCTCATCAAGGTTGTGGCTGCTGCCCTTAACCCTGTAGATTATAAGAGGGCCCGTGGAATTTTCAAGGTCAACGAACCTCCATTCCCAACAGCTCCAGGGTATGATGTTGCTGGCGTAGTGGTGAAAGTGGGAAGCAACGTGAAGAAATTTAAGGTTGGAGATGAAGTTTATGGTGATATCAGTGAGAGTACTGTGAAGCCAAAGGCTACTGGGAGCTTAGCAGAGTATACAAGTGCTGAAGAGAAGGTGTTGGCTCACAAACCCTCTAATTTGAGCTTTGTTGAAGCTGCTAGCCTCCCTTTAGCTATCATCACTGCCTATCAAGGTATTGAGAGAGCTCAATTTTCTGCTGGCAAATCTATTCTAGTTCTTGGAGGTGCTGGTGGAGTTGGAAGCCTTGTTATTCAGCTAGCAAAGCAAGTATTTGGTACATCAAAGGTAGCAGCAACTGCTAGTACTGGAAAATTGGAGCTGTTAAGGGAGTTAGGAGTAGACTTGCCTATTGATTATACAAAGGACAACATTGAAGAGCTGCCAGAAAAGTTTAATTTTGTGTATGACACAGTAGGACAAAGTGAGAGGGCATTGAAGGCTGTTAAAGAAGGAGGACAAGTAATAACAATTGCAGGACCTGCAACTCCACCTGCAATAGGGTTCTCTCTCACTTCAGATGGTGGTGTGTTAGAGAAACTGAAGCCTTATTTAGAGAGTGGCAAGGTGAAGCCAGTGTTGGACCCAAAGAGCCCTCTTCCATTTTCTAAGGTGATAGAAGCATTTTCATACCTCAAGACAACCAGAGCCACTGGAAAAAGTTGTTATACATCCAATCCCATAAACAAATTAAATAATGCATGTTCAATATAA 993 0.428 MAASTGSIPSHIKAWVYNEYGNIEDTLKLDSNIAIPEIKDDQVLIKVVAAALNPVDYKRARGIFKVNEPPFPTAPGYDVAGVVVKVGSNVKKFKVGDEVYGDISESTVKPKATGSLAEYTSAEEKVLAHKPSNLSFVEAASLPLAIITAYQGIERAQFSAGKSILVLGGAGGVGSLVIQLAKQVFGTSKVAATASTGKLELLRELGVDLPIDYTKDNIEELPEKFNFVYDTVGQSERALKAVKEGGQVITIAGPATPPAIGFSLTSDGGVLEKLKPYLESGKVKPVLDPKSPLPFSKVIEAFSYLKTTRATGKSCYTSNPINKLNNACSI 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211455g00045 330 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
Stsc211455g00045 330 SMART PKS_ER_names_mod 21 313 IPR020843 GO:0016491
Stsc211455g00045 330 Gene3D - 153 267 - -
Stsc211455g00045 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 286 IPR036291 -
Stsc211455g00045 330 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 314 IPR044626 GO:0016628
Stsc211455g00045 330 Pfam Alcohol dehydrogenase GroES-like domain 41 106 IPR013154 -
Stsc211455g00045 330 CDD MDR_like_2 13 313 - -
Stsc211455g00045 330 Gene3D - 19 313 - -
Stsc211455g00045 330 SUPERFAMILY GroES-like 9 168 IPR011032 -
Stsc211455g00045 330 Pfam Zinc-binding dehydrogenase 172 259 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211455g00045 Stsc-Chr211455 324068 326273 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211455g00045 71 231 Monolignol Biosynthesis Gene Families AT1G72680 27.368 1.47e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211455g00045 K18980 - gmx:100791274 460.685