Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211455g00042 ATGGCATCATCAGATGATTATTCTACTAGTGGCATTCCAAGTCACACAAAAGCATGGTTCTATTCAGAACATGGGAAGCCAGAAGATGTTCTGAAGGTTCATCCAAATTGGCCAATACCAGAATTGAAAGAGGACCAAGTGCTCATCAAAGTTGTGGCTGCATCCCTTAATCCAGTTGATAATAAAAGAATGACTGACTTCTACAAAGACTTATACAACCCTGATCCTCATCTCCCTATTGTTCCAGGATTTGATGTTGCCGGTATAGTGGTGAAATTGGGAGGTGAAGTGACGAAATTTAAGGTTGGGGACGAAGTTTACGGTGACATTAACGAGGAAGGGATAGAAAACCTGAAGAGTCTTGGGACTTTGTCGGAGTACACTATTGCTGAAGAGAGGCTTTTGGCTCACAAGCCCCCTAATCTCACCTTCGTTGAAGCTGCTAGCTTTCCTGCCGCAGTTGAGACTGCTTATGAAGGTCTTGACAGAGCTCAGTTTTCTGCTGGAAAATCTATTCTTGTTCTTGGAGGTGCTGGCGGAGTTGGAACTCATGTTATTCAGACACTTGGTAAATATAAATAA 582 0.4278 MASSDDYSTSGIPSHTKAWFYSEHGKPEDVLKVHPNWPIPELKEDQVLIKVVAASLNPVDNKRMTDFYKDLYNPDPHLPIVPGFDVAGIVVKLGGEVTKFKVGDEVYGDINEEGIENLKSLGTLSEYTIAEERLLAHKPPNLTFVEAASFPAAVETAYEGLDRAQFSAGKSILVLGGAGGVGTHVIQTLGKYK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211455g00042 193 Gene3D - 2 173 - -
Stsc211455g00042 193 SUPERFAMILY GroES-like 16 178 IPR011032 -
Stsc211455g00042 193 SMART PKS_ER_names_mod 25 193 IPR020843 GO:0016491
Stsc211455g00042 193 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 8 188 IPR044626 GO:0016628
Stsc211455g00042 193 Pfam Alcohol dehydrogenase GroES-like domain 45 109 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211455g00042 Stsc-Chr211455 316608 318007 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211455g00042 79 163 Monolignol Biosynthesis Gene Families AT4G37990 31.034 5.03e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211455g00042 K18980 - gmx:100788619 272.322