Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211455g00008 ATGGACTTGGAAGGTAGCGACGAATCCGAAAGCTGCATTGGTTGGGAATCGTGGTGGAGAATCGGAGATGTGGAGAGGGAGGACATTAGACCCGGAGAAGAAGATGAAGACCAGGCAAATCTGACCGAGGTGTCCGGTGGGGAGTGGGAGAATGGCACGGCGGAAGAGGAAGCAACGGAAGGGAACAGGGGAGAAGAGGTGGAGGACCAGAATGCGGACTGCCACAACCTTAATACCACAGGGGAAACCAGTCCTATGTTAATGGAGTCGGCTGAGTTCCAAGGGATTGAAGAGACATATGAAAGGTATGGGCCATATTCAAGGGAGAAAGAGTTTGCCGTTCGGAAGGGTGATGCGGTGAAGGATGAACAGGGCAATATAGTTAGGAAGTTCTTCTACTGCAATAGGCAAGGTTTGAGGGAAAAGAGGCACTACGAAAGGGTTGATAGAAAGAGAGCGCATAAGGCAGAGACAAGGACGAATTGCAAGGCTAAGTTGGTTGTTTACCTGGATAAGGGAACATGGAAGTAG 531 0.5009 MDLEGSDESESCIGWESWWRIGDVEREDIRPGEEDEDQANLTEVSGGEWENGTAEEEATEGNRGEEVEDQNADCHNLNTTGETSPMLMESAEFQGIEETYERYGPYSREKEFAVRKGDAVKDEQGNIVRKFFYCNRQGLREKRHYERVDRKRAHKAETRTNCKAKLVVYLDKGTWK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211455g00008 176 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 175 - -
Stsc211455g00008 176 MobiDBLite consensus disorder prediction 56 72 - -
Stsc211455g00008 176 Pfam FAR1 DNA-binding domain 103 174 IPR004330 -
Stsc211455g00008 176 MobiDBLite consensus disorder prediction 26 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211455g00008 Stsc-Chr211455 39678 40208 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc211455g00008 FAR1 1.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211455g00008 - - adu:107470907 136.346