Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211454g00003 ATGAAGTGTTCAGGCTCACTGTGCAACAACACCAAGATCACGGCGAGGCCGGAGACCGGAACACCGGATATTCACAAGAGAAGGATGTCATCACTTGCTGGGTGTAACAACAATGATGGTTCTTCAAGCAGATCCATGAAGGCTCCTCTGAATGAAATCAGCAATGGTGTTGTTTCTGCATCTTCATCTTCACTCTCAGCATCTTCTAGCTCCTCTGCTGGTGCCTCTTCCTTCAGGGGAATGCCATTCAGAAGGCTCTCTGGTTGCTATGAGTGTAGAATGGTGGTAGATCCTGTTCTTGGTTTCACCAGAGACCCTTCTCTTAGAAGCAGCATTTGTTCATGCCCTGATTGTGGTGAAATCATGAAAGCTGAGAGTTTAGAACATCATCAAGCTGTAAAACATGCAGTTTCTGAGCTTGGACCAGAGGATACAAGCAAGAACATAGTTGAAATCATTTTCCACTCAAGCTGGCTAAAGAAACAGACACCAGTGTGCAAGATTGACAGAATCCTCAAGGTTCAGAACACTCAGAGGACTATAGGAAAATTTGAAGAGTACAGAGACTCCATTAAAGCAAAGGCAACAAAGCTCACAAAGAAACATGCTCGTTGCATAGCAGATGGAAATGAGCTACTCAGATTTCACTGCACAACATTTGCTTGCTCGCTCGGCCTAAACGGTTCCTCCAACCTCTGCAACTCAATACCTCTGTGCAATGTTTGCAGCATAATCAAGCACGGTTTCAAGGTCACCACCGGAGAAGCAGCCGGTGGAAACAGTGGCATCCTAACCACTGCAACAAGCGGGAGGGCCCATGACATGGCTGGATTATCGCCTGCGGACGAAGGAAGCGACAAGAGGGCAATGCTGGTTTGCAGGGTGATAGCAGGGAGGGTTAAGAAGAACAACGCAGAAGGTGGTAATAGCAGCAGCAGCAGCACCATGGATGAGTATGATTCAGTTGCAGGAGCAGTTGGTGCTTATTCCAACTTGGATGAGTTGTATGTTTCAAATCCAAGAGCTATATTGCCATGCTTTGTTGTAATCTATAGAGGGTTTTGA 1065 0.4638 MKCSGSLCNNTKITARPETGTPDIHKRRMSSLAGCNNNDGSSSRSMKAPLNEISNGVVSASSSSLSASSSSSAGASSFRGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICSCPDCGEIMKAESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQTPVCKIDRILKVQNTQRTIGKFEEYRDSIKAKATKLTKKHARCIADGNELLRFHCTTFACSLGLNGSSNLCNSIPLCNVCSIIKHGFKVTTGEAAGGNSGILTTATSGRAHDMAGLSPADEGSDKRAMLVCRVIAGRVKKNNAEGGNSSSSSTMDEYDSVAGAVGAYSNLDELYVSNPRAILPCFVVIYRGF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211454g00003 354 SUPERFAMILY ADP-ribosylation 137 353 - -
Stsc211454g00003 354 Gene3D - 135 352 - -
Stsc211454g00003 354 FunFam C2H2-like zinc finger protein 136 352 - -
Stsc211454g00003 354 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 351 - -
Stsc211454g00003 354 MobiDBLite consensus disorder prediction 14 48 - -
Stsc211454g00003 354 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211454g00003 Stsc-Chr211454 13022 14402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211454g00003 78 352 C2H2 Transcription Factor Family AT1G75710 56.122 4.22e-107 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211454g00003 - - gmx:100814186 543.888