Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211453g00017 ATGAAGAAGATCTCATCCAACTCTTCTTATTCATCATCATCATCAACCTCAACTTCAGCTATGCGCAACAACTCCAAAAATGGATCATCTTCAGGTTGCTTCAACGCAATCCTCCGCAGGATTCTGTGTTCTGGTGGCCTCCCAACACACCCATCTGATCAAATTAGAGAATTTGATCCAAATCCAATTCTGGGTACTACAAAAGATCAAAACTTTAATCCCAAAAAGCACCATGCTAAAGCCACTACTAGTAGTAGTAGTGTTAGTTCTTCTGTTACAACAACAACTACTACTACTACTACGACTCCAGGGATAGTTGCAAGGTTGATGGGTCTGGATTCAATGGTGGAGATGCCTTCGAATTCATCTCTTTCGCGAAGCAAATCGATGAATTCGGTGGATTGCTTAGGGGAGGGTAATAGAATGGATGGCTTGCATAAGAGGGTAAAATCGACATTGTCATTTAGGGAGCTTCCAACTTTCCTCTTACTTGAAAATGAAAACTTCTTTGTGCTTACCTTCGAGAATAAGAAGAAGAAGAAGAATGTTAGTGGTGAAGAGTTGAAGGAAAAGAAGAGAGAAAATGTGAAGCTTCAAGAGATTACCAACACTTGTTATTATGAGAAGAACAAGAAGAACAAGAAGAAGAACAAGAACATGTGTTTTGATTCTGAAGCAAGGAAAGTGTCACAGCCCAGGATCCTTAAGGATGATGCTGCTGTTTTTGTTGGTGGTGGTGATGAGAGGATGAAGAGGAGAAGGAGGAGGAAGAGGAATTATAATAATAATAATTCAAATTGTTTCATAGAGAAGAAAAAGAGTGAAGTTGAATCCAAACCATCATCAGAAGATACAAGTCCTGTTTCTGTTCTTGATTTTGACAAGAGGGAAGAAGCTTGTGAAGCAGCCAATTTGAATTCAAGAAGGAAATTGTCACCAGAGCTTGAGAATGATCAGAAAATTCTAGTGCGTTCTGATGGAGATTTGATGGATGAAGAGGGAAAAACCAACAAATTAAGTGAAGAAGGATCAAAGAAAAAAGAGAAGAATGTGAAAATTTGGGATGAAATTTGCAAGCTAGCTAAGGAGGATGAAGTAGCATGGATGAATAATAATAAAAAACAGGATGGTGATTTAGGAAGCATTAGTGCTGATTTTGCTTCTCATATTTTTGATCAATTGTTAAATGAAGTGGTTGATCAACTTCTTGTTGAGGATCCATAA 1224 0.3807 MKKISSNSSYSSSSSTSTSAMRNNSKNGSSSGCFNAILRRILCSGGLPTHPSDQIREFDPNPILGTTKDQNFNPKKHHAKATTSSSSVSSSVTTTTTTTTTTPGIVARLMGLDSMVEMPSNSSLSRSKSMNSVDCLGEGNRMDGLHKRVKSTLSFRELPTFLLLENENFFVLTFENKKKKKNVSGEELKEKKRENVKLQEITNTCYYEKNKKNKKKNKNMCFDSEARKVSQPRILKDDAAVFVGGGDERMKRRRRRKRNYNNNNSNCFIEKKKSEVESKPSSEDTSPVSVLDFDKREEACEAANLNSRRKLSPELENDQKILVRSDGDLMDEEGKTNKLSEEGSKKKEKNVKIWDEICKLAKEDEVAWMNNNKKQDGDLGSISADFASHIFDQLLNEVVDQLLVEDP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211453g00017 407 Pfam DUF761-associated sequence motif 90 122 IPR032795 -
Stsc211453g00017 407 MobiDBLite consensus disorder prediction 322 346 - -
Stsc211453g00017 407 MobiDBLite consensus disorder prediction 1 29 - -
Stsc211453g00017 407 MobiDBLite consensus disorder prediction 77 101 - -
Stsc211453g00017 407 MobiDBLite consensus disorder prediction 50 101 - -
Stsc211453g00017 407 PANTHER OS05G0128300 PROTEIN 21 403 - -
Stsc211453g00017 407 MobiDBLite consensus disorder prediction 246 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211453g00017 Stsc-Chr211453 189968 191341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211453g00017 30 402 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 29.639 1.46e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211453g00017 - - ahf:112792310 466.463