Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211452g00055 ATGTACCGTAGAATCAACACCCGACCATTATACGTGGCTGACCCAGAGGACCAGGATAACGAGCCCGAGCCTGAGCCCGAGCCCGCGTCTGAAGCTGGGCCTGCTTCTCCTTCCTCTGGTGATGACACAAAATTTGAAGCACCATCACCTAAGAAAAGGAGGGAGATGAAGAAGAGAGTGGTCACAATACCGATCGGTGACGTGGACGGATCTAAGACCAAAGGAGAATCATATCCACCGTCCGATTCATGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAAGGCTCACCTTACCCAAGGGGATATTACCGATGCAGCAGCTCAAAAGGGTGCCCCGCGAGGAAGCAAGTTGAACGAAGCCGCGTGGACCCCACCAAGCTCATGATCACCTACAACTACGATCACAACCACTCTCTTCCGCTAACCAAATCCCACTCATCCTCCTCTTCCTCTTCCTCCGCCACCGTTACCGCCACCACTACCACCGTCACCGAAGTCGCTGTCGCCTCCTCTCCCTCTGACTCCGCCGCTGGCTTCCCGCCGGAAGATCTGACGGTATTCTCCAGCCACGTCGATCTCGACCTCGCCGGCGACTCCGCAGTACTTCTCTGCCACCATAACCACCACGGATTCGGGTGGTTCGACGACGTAGCCTCTGCCGGCGTCTTGGAGAGTCCGATCTGCGGAGGCATGGATGACATGGCGCTTACGGCGGAGGAGGATGACGAGGAAGAATCGCTGTTTGCCGGACTCGGCGAGCTGCCAGAGTGCTCGGCTGTTTTCCGGCGGAGGAATATTCCCCGTGCCAGCGCGATCCAGTGCGGTGGCATCACAGGATAA 843 0.5765 MYRRINTRPLYVADPEDQDNEPEPEPEPASEAGPASPSSGDDTKFEAPSPKKRREMKKRVVTIPIGDVDGSKTKGESYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLMITYNYDHNHSLPLTKSHSSSSSSSSATVTATTTTVTEVAVASSPSDSAAGFPPEDLTVFSSHVDLDLAGDSAVLLCHHNHHGFGWFDDVASAGVLESPICGGMDDMALTAEEDDEEESLFAGLGELPECSAVFRRRNIPRASAIQCGGITG 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211452g00055 280 ProSiteProfiles WRKY domain profile. 81 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211452g00055 280 FunFam WRKY transcription factor 65 67 141 - -
Stsc211452g00055 280 Pfam WRKY DNA -binding domain 82 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211452g00055 280 SMART WRKY_cls 80 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211452g00055 280 Gene3D WRKY domain 67 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211452g00055 280 SUPERFAMILY WRKY DNA-binding domain 76 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211452g00055 280 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 23 260 IPR044810 GO:0003700
Stsc211452g00055 280 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211452g00055 Stsc-Chr211452 397683 400679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211452g00055 25 267 WRKY Transcription Factor Family AT3G58710 50.000 6.70e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211452g00055 WRKY 5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211452g00055 - - ahf:112707218 449.129