Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211452g00053 ATGAGTTCAAAAGATGATAACAACACGTTATTCTCTACCAAACCTTCACCCGCATCTGGCAATAATAAGTCTAAGAAATCCTCACTTAGGCGGAAATTCAAGGCCCTACTGGGCTTTCCTAAACCTTCAGATCCAAGCCCGTTGGCCCACCCATACACCGCTTCTACTTCTACTTCTGCTAACGCCATCATCCAGGCCGCAGCATCTTCATCTCGTCGCACTCGTGTCTTCAAGTATGACGTGTTTCTCAGTTTCAGAGGCACTGATACTCGCAACACTTTCGTTGATCATCTCTGCAATAATCTCATCCGGAAAGGCATCTTCACTTTTATGGATGACAAGAGGCTCGAGAAGGGAGAACCGATCTCGTCGCAGCTCATTGAAGCGATTCGAGATTCGAGGGTTTCAATCGTAGTGTTCTCGAGAGATTATGCTGCTTCTGCATGGTGTTTGGAGGAGATGGCTACCATAGCTGAATGCGAGAAGGAATTGGGACAGAAAGTTTTCCCCATTTTCTATGATGTGGATCCTTCTCATGTTCGAAAGCAGAGCGGAGTGTATGAAACTGCATTCGCTCTGCATACAGCCAAATTCAGTCTTGGAAAGGTTGCGAGGTGGAAAAGCGCTATGACGAGCTTGGCCAATTCGGTTGGTTGGGATCTCAGAAACAAATCAGAGTATACAGAAATCAAAGAAATTATTTGGAAGGTGGTGAAAACATTGAACCACAGATTCTCAGGGTTTGATGATGATCTGGTTGGGATACAGCCTCGCGTAGAAAGATTAGAAGGGCTTCTAAAATTGAGCTCAATAGATGATAATCCACGGGTTATTGGAATTTGTGGCATGGGTGGTATAGGAAAAACAACTTATGCTAAGGTCTTATATGACAAAATCTCTTACCAGTTTGATGGTTGTTGTTTTATTGAGAATGTAAGCCAAAGTTATAGAGATGGCGGTGCTGTTATTATTCAAAAGCAAATCCTTAATCAAGCTCTAGACGAACAAAATCTAGAGATGTTTAGTCACTTTGAGATATCTGACATATTAAGAAAGAGGCTGTCTTGCATAAAGGTTCTTATAGTTCTTGACAATGTTGATGAGCTGCAGCAATTGGAGGAATTGGCTATAAGTCCTAAATTACTTGGGAGAGGTAGTAGAATTATCATAGTTACTAGGGATGAGCATATTTTGAAAGTTTATGGAGCAGATGAAATTGATAGGGTTGCAATGTTGAATGACAATGAAGCTCGTGAACTTTTTTTAAGAAAAGCATTGGATAATGATGGTTCTAGCAGTAGCAAATACATGTATCTGATTCCTAAAATACTGGAATATGCTCAAAATCTTCCATTAGCAGTCAAAGTAGTGGGTTCGATGTTGCATTCCCGTGATGTTTCCCAGTGGACTGATGCCTTGAAAAGAATGAGGAAAATTCCAAACAAAAATATTATGGATGTGCTTCAGATAAGTTTTGAAGGATTGGAATTATCTGAGAAAGAAATATTTCTACATATTGCTTGTTTCTTTCATGGTGAAAGAGAAGATTATGTAAAACAAATTCTAGATAGTTGTGGACTGTATCCTCATATTGGACTTCCAATTATTATGGAGAAATCACTCATAACCATTAGAAATCAAGAGATTCATATGCACGAAATGGTACAAGAATTGGGGAAGAAAATTGTTCGGGAGAAAGCTCCAGAAGAACCAGGATCATGGAGTAGATTATGGCTTTATCACGATTTCTACCGTGTATTGACTTCAGCAACGGGATCTTATAATGTTAAAGCCATAGTTTTGGATCAGAAAGAGGATGTTTCCAAATATAGTCAATTGAGGATTGAAGGATTATCAAAACTGATGGGTCTTAAGCTACTCATATTACATCACAAGAATTTTTCAGGAAGTCTTGATTTTCTTTCTGACAACTTACAATATATTTTGTGGCATGGCTATCCTTTCTCTTCACTACCACTAAATTTTGATCCACATAGTCTTGTTGAACTACATTTGCCTAATAGCAACATCAAACTACTATGGGAAAGCCCGAAGAGTTTCCCATGTTTGAAAAAGATGGATTTGAGCAACTCAAAATATCTCATGAAGACACCAAATTTTCGACGGATCCCAAATCTGAAATGGCTGGATCTTTCAGGATGCACAAATCTATCACAGGTTCACTTCTCAATTGGACTTCTTACACAACTTGCATACCTCAATTTGCGTAATTGTAGCAATTTGGTCAGCATTGATCTCAACCCTGAATACAACTTGTATTCTTTGAAAGTTCTAAACCTCTCTGGCTGCACAAAACTCAAGAACACCCCAGATTTTACAGGGCTGTCAAATCTTGAGTACCTTGACCTTGAAAAATGCACAAGTTTATCCGAAGTTCCTGAATCTATTGGGGCTCTTGTAATGCTTAAGTTCTTCAGTTTGAGAGGGTGCATAAATCTTGTCCAGCTACCTGCCAGTGTCAACAATTTGACATGTCTTCAAAATCTAGATTTACATGACTGCTTCAAACTGATGAATCTTCCGCTAAGACAAATAACCATTTCATCCCCCAATCTAAGATATTTGATATTTTTAGATCTTGGGTCCTGCAAGATAAACGTAATTCCTGATGCTATTAGAGATCTAAAGTGCTTAGAAAGACTAAATCTACAAGGAACCAGAATTCAATCTTTACCCGAAACCATGAAGAGCCTTTCCTGCCTGGCATATTTAAACTTGTCAGATTGCCATGAGCTTGTTGAATTGCATGATCTTCCATTTGAAAGTGCTTCATCGGGGGGAAGGTATTTTAAGAAAGTATCAGCATCTCGTAATCATAGATCGGGATTATATATTTTCAACTGCAGCAAGGTTATGAAATGTCACTGGATGTTAGTTGCAATTTCATGGTTAGCAAGACTTGTTAAGAAACCCTGTCACTTTCGATGTGGTTTTGACATTGTAGTACCTTTTATGAGGACTGAAATTCCAGAATGGTATTTCAATAATCGATTTGAGGGTGGCTCAACAATAAGGATAGCTCCCTCTGGTGTAGATGATTGGCTTGGTTTTGCCTTTTGTGCAATATTCGAGGTGAACAAAAATAGTCTAACAAATCCTTGCTCCTCTTCAAAGCTGCCACGTCCTTTGTATCTTTCATTTGAAAGTGAAAACACAGAAGAATGCTTTGACTTCCCGGCTTGTTTAGACATGGAGAAGGAGTATGTTGGTCCAATATCAAGATATTGCTGGATAATCTATATCTCTCAAGCACACTGCCATTTTGTGAAAACAGGAACCCGTATCACGTTTAAACCATGCCCAGGCTTACAGGTGAAGGAATGGGGTCTACGCATGGTAACCATGGAGGATACAGGGTTGATAAGGAGAAACTTCAGCAAAATGAACAGTGAAGGCGATGTTCCTTGGTTTCGTCGTTGTATAGACGAAAGCTCTGATCCTAAAATCGATCTTTCCAATGAATATGATATTTTGTATACCAAGGATGAGCATGAGAATGAGAGTAATAATGGATTTGGGCCTAAAATCCAGCTACCCTACAATTGGTATGTAACTGATGAGGAGGAAAAGGAGAATATGGATGCCAAGGCCAAGGAAATTAATTTTTATAATCTTGGCCATTCTTCCATAGAAGAAGTCCAGGAAGTTGTGAACAGCCCTTCTTCCTCACAGGAAGAGGAAAGCATGAGAATGAAAGACGTAGCATTGCAGATAGCCTCTGATCAGGAAAGTGATTGCTCATACATGAGCGATTTATCTCCGAGGTAA 3789 0.3927 MSSKDDNNTLFSTKPSPASGNNKSKKSSLRRKFKALLGFPKPSDPSPLAHPYTASTSTSANAIIQAAASSSRRTRVFKYDVFLSFRGTDTRNTFVDHLCNNLIRKGIFTFMDDKRLEKGEPISSQLIEAIRDSRVSIVVFSRDYAASAWCLEEMATIAECEKELGQKVFPIFYDVDPSHVRKQSGVYETAFALHTAKFSLGKVARWKSAMTSLANSVGWDLRNKSEYTEIKEIIWKVVKTLNHRFSGFDDDLVGIQPRVERLEGLLKLSSIDDNPRVIGICGMGGIGKTTYAKVLYDKISYQFDGCCFIENVSQSYRDGGAVIIQKQILNQALDEQNLEMFSHFEISDILRKRLSCIKVLIVLDNVDELQQLEELAISPKLLGRGSRIIIVTRDEHILKVYGADEIDRVAMLNDNEARELFLRKALDNDGSSSSKYMYLIPKILEYAQNLPLAVKVVGSMLHSRDVSQWTDALKRMRKIPNKNIMDVLQISFEGLELSEKEIFLHIACFFHGEREDYVKQILDSCGLYPHIGLPIIMEKSLITIRNQEIHMHEMVQELGKKIVREKAPEEPGSWSRLWLYHDFYRVLTSATGSYNVKAIVLDQKEDVSKYSQLRIEGLSKLMGLKLLILHHKNFSGSLDFLSDNLQYILWHGYPFSSLPLNFDPHSLVELHLPNSNIKLLWESPKSFPCLKKMDLSNSKYLMKTPNFRRIPNLKWLDLSGCTNLSQVHFSIGLLTQLAYLNLRNCSNLVSIDLNPEYNLYSLKVLNLSGCTKLKNTPDFTGLSNLEYLDLEKCTSLSEVPESIGALVMLKFFSLRGCINLVQLPASVNNLTCLQNLDLHDCFKLMNLPLRQITISSPNLRYLIFLDLGSCKINVIPDAIRDLKCLERLNLQGTRIQSLPETMKSLSCLAYLNLSDCHELVELHDLPFESASSGGRYFKKVSASRNHRSGLYIFNCSKVMKCHWMLVAISWLARLVKKPCHFRCGFDIVVPFMRTEIPEWYFNNRFEGGSTIRIAPSGVDDWLGFAFCAIFEVNKNSLTNPCSSSKLPRPLYLSFESENTEECFDFPACLDMEKEYVGPISRYCWIIYISQAHCHFVKTGTRITFKPCPGLQVKEWGLRMVTMEDTGLIRRNFSKMNSEGDVPWFRRCIDESSDPKIDLSNEYDILYTKDEHENESNNGFGPKIQLPYNWYVTDEEEKENMDAKAKEINFYNLGHSSIEEVQEVVNSPSSSQEEESMRMKDVALQIASDQESDCSYMSDLSPR 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211452g00053 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 243 506 IPR027417 -
Stsc211452g00053 1262 MobiDBLite consensus disorder prediction 1 29 - -
Stsc211452g00053 1262 Gene3D Ribonuclease Inhibitor 591 755 IPR032675 -
Stsc211452g00053 1262 ProSiteProfiles TIR domain profile. 77 242 IPR000157 GO:0007165
Stsc211452g00053 1262 Pfam NB-ARC domain 267 481 IPR002182 GO:0043531
Stsc211452g00053 1262 Gene3D - 76 248 IPR035897 -
Stsc211452g00053 1262 Gene3D - 249 405 IPR027417 -
Stsc211452g00053 1262 MobiDBLite consensus disorder prediction 1 24 - -
Stsc211452g00053 1262 SUPERFAMILY "Winged helix" DNA-binding domain 483 587 IPR036390 -
Stsc211452g00053 1262 Gene3D Ribonuclease Inhibitor 756 851 IPR032675 -
Stsc211452g00053 1262 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 79 751 IPR044974 GO:0006952
Stsc211452g00053 1262 SUPERFAMILY L domain-like 618 953 - -
Stsc211452g00053 1262 SUPERFAMILY Toll/Interleukin receptor TIR domain 69 219 IPR035897 -
Stsc211452g00053 1262 SMART till_3 78 216 IPR000157 GO:0007165
Stsc211452g00053 1262 PRINTS Disease resistance protein signature 277 292 - -
Stsc211452g00053 1262 PRINTS Disease resistance protein signature 447 461 - -
Stsc211452g00053 1262 PRINTS Disease resistance protein signature 708 724 - -
Stsc211452g00053 1262 PRINTS Disease resistance protein signature 353 367 - -
Stsc211452g00053 1262 Gene3D - 411 496 IPR042197 -
Stsc211452g00053 1262 Pfam TIR domain 78 237 IPR000157 GO:0007165
Stsc211452g00053 1262 Gene3D Ribonuclease Inhibitor 852 967 IPR032675 -
Stsc211452g00053 1262 FunFam Disease resistance protein (TIR-NBS-LRR class) 75 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211452g00053 Stsc-Chr211452 387964 392803 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211452g00053 79 888 WRKY Transcription Factor Family AT4G12020 31.453 2.93e-89 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211452g00053 - - adu:107462392 1239.56