Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211452g00051 ATGCATGAGATGTTGCAAGATTTGGGAAAGAAAATTGCTCGGGAGAAATCTCCTCAAGAACCTGGATCATGGGGTAGGATATGGAGTTACAAGGATTTCCATCGTGTCTTAATACCAAAAGGGGGAACAAATGAAATTAAAGGCATAGTTCTTCATGTGAAAGAGGACATGCGCAAATGCAATCAGTTGAACGTTGAAGAATTGTCCAAAATGGTGGGTCTTAAGCTGCTCATTATACATCAAGAAAACTATTCAGGAAGCCTTAACTCTCTTTCTAATTGTCTGGAGTACCTTTCGTGGCATGGTTACCCATTCCCTTCTTTGCCATTAAATTTTGAACCTTTTGCCAGTCTTGTTGAATTGAATCTCCCTGGTAGTAGTATCCAACACCTATGGGAAGGCCGCAAGAGTTTAGTCTGCCTTAGAAGAGTGGATTTGAGCAACTCGAAAGAGCTTCTGGAGACGCCAAATTTTGAATGGTGCACAAATCTTAAGCGATTAGATTTGTCAGGATGCACAAACCTACAGAAAGTCCACCCATCAATTGGACTTCTTGAACGGCTTGTCTACTTAAACTTGCGAGACTGTAATAGTTTGGTTAGCCTCAACTTTGGTGATGATTGCAAGTTAAGTTCTCTGATAGTTCTACATCTTTCAGGCTGCACAAAATTGGAAAATACGCCAGATTTTTCAGGGCTCTTAAATCTTGAATACCTTGATCTTGAACAATGTACAAGTTTGGCCGAGCTGCATGACTCTATCTGGGCCCTTGGGAAACTTAGATCTTTGAGTTTGAGAGGCTGTACAAGGCTTAAGGAGGGACCTGATGGTATCGGTTGTATGACATCTCTTCAAACTCTAGATTTTCAGGGCTGCTCAAAACTTTCAGAACTACAGCTTGTTAGAAGCAAAAATAAAAGAGCCAAACTTTCCAACACTATTGCCAAGTCCATTACTTATTCTCTGGTTCCGGAAGCTTTGGCATTTCGGAATCTTGGCTTTTCTAATCTATGGAAACTCCCTGATGATATTGGGGAATTAAGGGGGTTAGAAAGACTAAATTTACAGGGAAACAAATTCTGCAGTTTACCCGATACCATTGGGAAGCTTTCCAGCCTAGCATATTTGAACTTGGAACATTGCTTTAATCTTTCTTCGCTGCCTCGGTTCCCATTTGTCAATGACTCATCAGGAGGACGATATTTTAAAACAATATCCGGATCAAGGAATCAGAGATCAGGACTGTATGTCTTTAACTGTCGCGGAATCAATAAATGGTGTTGTCTAAATTGGGCATTTGTTTGGCTAACAAGATTAATTGAGGTGCGAAATTATCTGCTATGCCTGAATTTCTCTTCTTTCACACACGATCTCTATCTCATTGATACTATTTTTTTGAAAATGGAAAACGAAAAAATCTTTTGCAGAGAGTCCGAACTGATATATCTTTGTGTGTTTCCTTTGGTACCAGAAACCTTGTCATTTCAGGTGCGGTTTTGA 1500 0.4 MHEMLQDLGKKIAREKSPQEPGSWGRIWSYKDFHRVLIPKGGTNEIKGIVLHVKEDMRKCNQLNVEELSKMVGLKLLIIHQENYSGSLNSLSNCLEYLSWHGYPFPSLPLNFEPFASLVELNLPGSSIQHLWEGRKSLVCLRRVDLSNSKELLETPNFEWCTNLKRLDLSGCTNLQKVHPSIGLLERLVYLNLRDCNSLVSLNFGDDCKLSSLIVLHLSGCTKLENTPDFSGLLNLEYLDLEQCTSLAELHDSIWALGKLRSLSLRGCTRLKEGPDGIGCMTSLQTLDFQGCSKLSELQLVRSKNKRAKLSNTIAKSITYSLVPEALAFRNLGFSNLWKLPDDIGELRGLERLNLQGNKFCSLPDTIGKLSSLAYLNLEHCFNLSSLPRFPFVNDSSGGRYFKTISGSRNQRSGLYVFNCRGINKWCCLNWAFVWLTRLIEVRNYLLCLNFSSFTHDLYLIDTIFLKMENEKIFCRESELIYLCVFPLVPETLSFQVRF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211452g00051 499 Pfam Leucine Rich Repeat 118 134 IPR011713 -
Stsc211452g00051 499 Gene3D Ribonuclease Inhibitor 320 475 IPR032675 -
Stsc211452g00051 499 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 212 299 IPR044974 GO:0006952
Stsc211452g00051 499 Gene3D Ribonuclease Inhibitor 42 207 IPR032675 -
Stsc211452g00051 499 Gene3D Ribonuclease Inhibitor 208 319 IPR032675 -
Stsc211452g00051 499 SUPERFAMILY L domain-like 61 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211452g00051 Stsc-Chr211452 336782 339553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211452g00051 1 389 WRKY Transcription Factor Family AT4G12020 32.000 1.41e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211452g00051 - - adu:107462392 621.313