Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211452g00050 ATGCATGAGATGTTGCAAGATTTGGGAAAGAAAATTGCTCGGGAGAAATCTCCTCAAGAACCTGGATCATGGGGTAGGATATGGAGTTACAAGGATTTCCATCGTGTCTTAATACCAAAAGGGGGAACAAATGAAATTAAAGGCATAGTTCTTCATGTGAAAGAGGACATGCGCAAATGCAATCAGTTGAACGTTGAAGAATTGTCCAAAATGGTGGGTCTTAAGCTGCTCATTATACATCAAGAAAACTATTCAGGAAGCCTTAACTCTCTTTCTAATTGTCTGGAGTACCTTTCGTGGCATGGTTACCCATTCCCTTCTTTGCCATTAAATTTTGAACCTTTTGCCAGTCTTGTTGAATTGAATCTCCCTGGTAGTAGTATCCAACACCTATGGGAAGGCCGCAAGAGTTTAGTCTGCCTTAGAAGAGTGGATTTGAGCAACTCGAAAGAGCTTCTGGAGACGCCAAATTTTGAATGGTGCACAAATCTTAAGCGATTAGATTTGTCAGGATGCACAAACCTACAGAAAGTCCACCCATCAATTGGACTTCTTGAACGGCTTGTCTACTTAAACTTGCGAGACTGTAATAGTTTGGTTAGCCTCAACTTTGGTGATGATTGCAAGTTAAGTTCTCTGATAGTTCTACATCTTTCAGGCTGCACAAAATTGGAAAATACGCCAGATTTTTCAGGGCTCTTAAATCTTGAATACCTTGATCTTGAACAATGTACAAGTTTGGCCGAGCTGCATGACTCTATCTGGGCCCTTGGGAAACTTAGATCTTTGAGTTTGAGAGGCTGTACAAGGCTTAAGGAGGGACCTGATGGTATCGGTTGTATGACATCTCTTCAAACTCTAGATTTTCAGGGCTGCTCAAAACTTTCAGAACTACAGCTTGTTAGAAGCAAAAATAAAAGAGCCAAACTTTCCAACACTATTGCCAAGTCCATTACTTATTCTCTGGTTCCGGAAGCTTTGGCATTTCGGAATCTTGGCTTTTCTAATCTATGGAAACTCCCTGATGATATTGGGGAATTAAGGGGGTTAGAAAGACTAAATTTACAGGGAAACAAATTCTGCAGTTTACCCGATACCATTGGGAAGCTTTCCAGCCTAGCATATTTGAACTTGGAACATTGCTTTAATCTTTCTTCGCTGCCTCGGTTCCCATTTGTCAATGACTCATCAGGAGGACGATATTTTAAAACAATATCCGGATCAAGGAATCAGAGATCAGGACTGTATGTCTTTAACTGTCGCGGAATCAATAAATGGTGTTGTCTAAATTGGGCATTTGTTTGGCTAACAAGATTAATTGAGAAACCTTGTCATTTCAGGTGCGGTTTTGACATTGTTATCCCTGGGGATGTAATTCCACCCTGGTATTTCAATCGTCAATTTAAGTGTGGATCAACAGTAAGGATAGTGGACTCAGTTGTGGATGACAATTGGATAGGCTTTGCCTTTTGTGTAGCATTTAGTGTAATCTATCTCCGCCCTTCAGCAGTTTCTGGTTTTTCACATAACCGGTTGTCCACAACATTGCCAAGTCCATTATATCTTTCATTTGAAAGTGAACAAGCAGAAGAAACCTTCTCTATGAAATGCAACTTATATCCGGAGGTTCGGGACATCCATGGTTTCCAAACTTCTCTAAAGCCAAGAGTAGTACATGTCTGGATTATCTATATCTCTCGGCCACACTGCCATTTTGTAAGAACAGGAGCCAATATCACATTTAAAACCTGCCCAGGCATTGAGATGAAGAATTGGGGATTGCGAATGGTATTCAAGCAAGATATAGAGGCAATTAAGAGCGACTTACAATATCGGGAAACCTCAAAAATGACTGACGGCTTTTACTATTCCATGTATGAACCTAAATTCCAATTTCATGATGATAGGTTGGTTATTGAGAATGTGCATGAAAGCAGCAACAGTAGCACTGGGCCTAAAATCCAGCTTCCCTACAATTGGTTTGTAACTGATGAAGAGGAAAAGGAGAACTTGGAAGCCAAAGACAAAGAAATTAATCTCGCTAATATTGGCCTTCAATGA 2061 0.4037 MHEMLQDLGKKIAREKSPQEPGSWGRIWSYKDFHRVLIPKGGTNEIKGIVLHVKEDMRKCNQLNVEELSKMVGLKLLIIHQENYSGSLNSLSNCLEYLSWHGYPFPSLPLNFEPFASLVELNLPGSSIQHLWEGRKSLVCLRRVDLSNSKELLETPNFEWCTNLKRLDLSGCTNLQKVHPSIGLLERLVYLNLRDCNSLVSLNFGDDCKLSSLIVLHLSGCTKLENTPDFSGLLNLEYLDLEQCTSLAELHDSIWALGKLRSLSLRGCTRLKEGPDGIGCMTSLQTLDFQGCSKLSELQLVRSKNKRAKLSNTIAKSITYSLVPEALAFRNLGFSNLWKLPDDIGELRGLERLNLQGNKFCSLPDTIGKLSSLAYLNLEHCFNLSSLPRFPFVNDSSGGRYFKTISGSRNQRSGLYVFNCRGINKWCCLNWAFVWLTRLIEKPCHFRCGFDIVIPGDVIPPWYFNRQFKCGSTVRIVDSVVDDNWIGFAFCVAFSVIYLRPSAVSGFSHNRLSTTLPSPLYLSFESEQAEETFSMKCNLYPEVRDIHGFQTSLKPRVVHVWIIYISRPHCHFVRTGANITFKTCPGIEMKNWGLRMVFKQDIEAIKSDLQYRETSKMTDGFYYSMYEPKFQFHDDRLVIENVHESSNSSTGPKIQLPYNWFVTDEEEKENLEAKDKEINLANIGLQ 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211452g00050 686 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 210 299 IPR044974 GO:0006952
Stsc211452g00050 686 Pfam C-JID domain 454 603 IPR045344 -
Stsc211452g00050 686 SUPERFAMILY RNI-like 95 392 - -
Stsc211452g00050 686 Gene3D Ribonuclease Inhibitor 48 323 IPR032675 -
Stsc211452g00050 686 Gene3D Ribonuclease Inhibitor 324 440 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211452g00050 Stsc-Chr211452 336782 339553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211452g00050 1 389 WRKY Transcription Factor Family AT4G12020 31.849 1.50e-37 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211452g00050 - - adu:107462392 921.383