Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211451g00066 ATGGTGCTTCCTGCTTACCCTTCTAAGGTACTAATTGGACTCTCTTTGGACTCAGATGACAGCAAGGAGATTCTCTCATGGGCAATAAGAGTCCTTGCCAAACCAAATGACAGCATTGTAGCAGTGCATGTTCTTGTTACTGAGGATAAGAAGAAGCGCGTTTCAGTCAGAAAGAGGCAGTCACAACTTAGGCAGGCAAAGGCTCATGTTATATCTATGCTAGGAGATTTTGCACAAACATGTTGGTCTAAGCAGGTTAATCTGGAGGCAAGAGTGGCATTCAGTTCCACAGTAGGTGGAGGTTTAGCTGAGGAAGCCAAGAACATCAATGCTGATTTTCTTCTCCTACGTGGCTCAAGAAACCCCAAAAACAAGAATGGAAGTTCCAAGGGAATTAGCAAGTACTGCTTTGAGCATGCACATGAAGGATGCACCGTGGTCTCGGTTGGGAAATTCGCCAAAGCAGAACAAGATGATAGTGAAGCAAGTTCTAAATGGTTAACAAAGGATGATGATAAACAAGTTGATAAGGTTGTTCTGAATGAATTCATGTCTGACCCTGAGTCTAAAGAACAGAACGGTTCGCCAAGAACCGTCCTGGATGCGCTGGAGGGGCAATCCAACAGCACAGAAGATGATACATTCAGCACTATGGTGTCAAGCACCTGCACCATAGATACACCTTCATTGGTTCCAAAGAGAAGATCAAAGCCACAATCTCCCTTGAGGCGCATAGCCTCCTTCCTTGGATCACCATTCCGAAGAAAACACAGCATATCCAAGGATGAAACGGCTCAGCCCTTGTTGAAGTGCTTCAGCTATGACCAGATAGCCAATGCTACTAATGAATTCCACCAAGATAATTTGGTTGGGCGAGGCGGATACTCAGAAGTATACAAAGGTGATCTTTGTGACGGAAGAAGCATTGCTGTGAAGAGATTGGCAAAGGACAACAATGATCCTAACAAGGAGAAAGAGTTCCTTATGGAATTGGGAGTTATTGGACATGTCTGCCATCCTAACACTGCATCCTTGGTTGGATGCTGCGTCGAAAATGGACTCTATCTCGTTTTCAATTACTCTCAGAATGGAAACCTGGCAACTTCATTGCACGGTAAAGGTGGAGATCCACTTGACTGGCCAATCAGATACAAGATTGCTATTGGAGTTGCAAGGGGACTCCATTACCTTCATAAATGTTGCAAACACAGGATAATTCATCGCGATATCAAAGCTTCCAATGTTCTTCTAGGCCCTGATTATGAGCCACAGATAACGGATTTTGGGCTTGCAAAGTGGCTACCAAACAAGTGGAGTCATCATGCTGTGATCCCAGTAGAAGGGACATTCGGATACTTAGCACCTGAGTACTTCATGCATGGGATTGTGGATGAGAAAACAGATGTTTTTGCATTTGGTGTTCTTCTTCTTGAGATTGTAACTGGACGTAGACCTGTTGATTCATCAAGCCAAAACCTTCTCCTTTGGGCAAAGCCTCTCATGGAATCAGGGAATATTGGAGAGCTAGCAGATCCAAGAATGGAAGGTAAATATGATGAAGAGCAACTGTATAGGTTGGTGCTTACAGCTTCATACTGTGTGAGACAAAATGCCACGTGGCGTCCTCCAATGAGCGAGGTGTTAGAGTTGCTGACAAGTGGGAATGAGAGTGAGGCAGGGAAAAGCTGGAGGATCCCAAAATTCACTTCAGATGAATTGGATGATTATTCCATGGTCTTTGGATATCATGTCCCCTCAGACATATCTCTTGAGGATTTTCTCTGA 1785 0.4426 MVLPAYPSKVLIGLSLDSDDSKEILSWAIRVLAKPNDSIVAVHVLVTEDKKKRVSVRKRQSQLRQAKAHVISMLGDFAQTCWSKQVNLEARVAFSSTVGGGLAEEAKNINADFLLLRGSRNPKNKNGSSKGISKYCFEHAHEGCTVVSVGKFAKAEQDDSEASSKWLTKDDDKQVDKVVLNEFMSDPESKEQNGSPRTVLDALEGQSNSTEDDTFSTMVSSTCTIDTPSLVPKRRSKPQSPLRRIASFLGSPFRRKHSISKDETAQPLLKCFSYDQIANATNEFHQDNLVGRGGYSEVYKGDLCDGRSIAVKRLAKDNNDPNKEKEFLMELGVIGHVCHPNTASLVGCCVENGLYLVFNYSQNGNLATSLHGKGGDPLDWPIRYKIAIGVARGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWSHHAVIPVEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLEIVTGRRPVDSSSQNLLLWAKPLMESGNIGELADPRMEGKYDEEQLYRLVLTASYCVRQNATWRPPMSEVLELLTSGNESEAGKSWRIPKFTSDELDDYSMVFGYHVPSDISLEDFL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211451g00066 594 Gene3D HUPs 5 149 IPR014729 -
Stsc211451g00066 594 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 141 - -
Stsc211451g00066 594 ProSiteProfiles Protein kinase domain profile. 284 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211451g00066 594 FunFam Probable receptor-like serine/threonine-protein kinase At5g57670 361 565 - -
Stsc211451g00066 594 Gene3D Transferase(Phosphotransferase) domain 1 362 567 - -
Stsc211451g00066 594 FunFam Putative receptor-like serine/threonine-protein kinase 253 360 - -
Stsc211451g00066 594 Gene3D Phosphorylase Kinase; domain 1 246 360 - -
Stsc211451g00066 594 CDD STKc_IRAK 290 552 - -
Stsc211451g00066 594 PANTHER OS08G0249100 PROTEIN 59 564 IPR046958 -
Stsc211451g00066 594 CDD USP_Like 9 149 - -
Stsc211451g00066 594 SUPERFAMILY Protein kinase-like (PK-like) 258 551 IPR011009 -
Stsc211451g00066 594 Pfam Universal stress protein family 9 147 IPR006016 -
Stsc211451g00066 594 Pfam Protein tyrosine and serine/threonine kinase 286 550 IPR001245 GO:0004672|GO:0006468
Stsc211451g00066 594 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
Stsc211451g00066 594 SMART serkin_6 284 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211451g00066 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211451g00066 Stsc-Chr211451 439705 442230 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211451g00066 272 590 Trihelix Transcription Factor Family AT1G70460 39.763 7.63e-74 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Stsc211451g00066 PK_Tyr_Ser-Thr 9.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211451g00066 - - gmx:100782832 955.666