Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211451g00061 ATGGGGTTTGAGAAACATATTGGTAAGTATAGGCTTGGAAGGACAATTGGAGAAGGAACATTCTCCAAGGTTAAGCTTGCTGTGAATGCTGACAATGGAGACAAAGTTGCAATCAAAGTCATTGATAAGCATATGGTCATGGAGAACAATCTTAAGAACCAGGTCAAAAGAGAGATTAGTACAATGAAACTTCTTCATCATCCCAATATTGTCCGAATTTTCGAGGTGATTGGGACTAAAACGAAAATATACATTGTGATGGAATATGTATCAGGAGGACATGTACTAGACAAGATGTCCTATGAGAAGAAGCTGAGTGAGCGTGTGGCAAGGAAACTATTCCAGCAGCTTATTGATGCCATGGACTATTGCCATAACAAAGGAGTCTATCACAGAGATCTCAAGCCAGAAAACTTGCTGCTTGACAGCAAAGGAAACCTCAAAGTATCTGACTTTGGATTAAGTACACTCCAAAAGCCTAATGATCTCTTAAACACACGTTGTGGCTCCCCATGCTATGTGGCACCTGAGTTGCTACTGAGCAAGGGATATGATGGAGCTTCTGCTGATGTTTGGTCATGTGGGGTGGTTCTTTTTGAATTACTTGCAGGCTTCTTACCATTTGATGATCACAACTTGATGAGCTTATATGAGAAGATATGCAGAGCAGAATACAAATGTCCACCATGGTTTACTCGAAATCAAAAGAAACTAATTGCCAAAATATTTGTACCACGTCCTGGAAAGAGGATAACTATTCCGGATATTATTGAAGATGAGTGGTTTCGAACAGATTATGAACCTGCTTGTGTATCTGAATGTGATCAGAATGTTAAGCTTGATGATTGCAATGCTGTATTTGATTCAGTTGAGGAGAAAATCAGAGAGTCAAAGATACCAAAGTCCTCAAGTTTCATTAATGCATTTCAACTAATAGCCATGTCTCAGGACCTTGATCTTTCTGGGCTTTTTGAAGAAGAACAGGGCCACAAGAAGCAGACGACAAGATTTGGATCCAAACACACAATCAATGAAACAATAGAAAAAATAGAAGCTGCTGCAACAGATATGAGACTGTCAGTAGAGAAAATAAACAACTTTAAGATAAAAATGCATCCGGAACAGATGATGACTAGATGTTCTAGATCATACTTTGATCTATCAGCACAGTTGATTGAAGTTGCTCCAACTCATTGTGTTGTAGAAATATCAAAATCTACAGGAGATCTAAGAACATATAACAAATTCTGTGAAAGTCTATCAAGTCTGCTGGAACAAAAATCCTGTTTGCATTGA 1296 0.3843 MGFEKHIGKYRLGRTIGEGTFSKVKLAVNADNGDKVAIKVIDKHMVMENNLKNQVKREISTMKLLHHPNIVRIFEVIGTKTKIYIVMEYVSGGHVLDKMSYEKKLSERVARKLFQQLIDAMDYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSTLQKPNDLLNTRCGSPCYVAPELLLSKGYDGASADVWSCGVVLFELLAGFLPFDDHNLMSLYEKICRAEYKCPPWFTRNQKKLIAKIFVPRPGKRITIPDIIEDEWFRTDYEPACVSECDQNVKLDDCNAVFDSVEEKIRESKIPKSSSFINAFQLIAMSQDLDLSGLFEEEQGHKKQTTRFGSKHTINETIEKIEAAATDMRLSVEKINNFKIKMHPEQMMTRCSRSYFDLSAQLIEVAPTHCVVEISKSTGDLRTYNKFCESLSSLLEQKSCLH 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211451g00061 431 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211451g00061 431 FunFam Non-specific serine/threonine protein kinase 2 89 - -
Stsc211451g00061 431 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211451g00061 431 FunFam Non-specific serine/threonine protein kinase 301 428 - -
Stsc211451g00061 431 Pfam NAF domain 304 363 IPR004041 GO:0007165
Stsc211451g00061 431 SUPERFAMILY Protein kinase-like (PK-like) 7 304 IPR011009 -
Stsc211451g00061 431 Gene3D Transferase(Phosphotransferase) domain 1 90 290 - -
Stsc211451g00061 431 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Stsc211451g00061 431 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Stsc211451g00061 431 Gene3D Kinase associated domain 1, KA1 301 427 - -
Stsc211451g00061 431 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 419 - -
Stsc211451g00061 431 FunFam Non-specific serine/threonine protein kinase 3 303 - -
Stsc211451g00061 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Stsc211451g00061 431 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211451g00061 431 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Stsc211451g00061 431 CDD CIPK_C 307 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211451g00061 Stsc-Chr211451 404394 407489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211451g00061 6 420 CBL-interacting serine-threonine protein kinases AT1G01140 48.086 1.48e-147 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc211451g00061 Pkinase 6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211451g00061 - - gmx:100786097 700.664