Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211451g00055 ATGTGTAATAAAGGGTTTCAATGCTTCCTGGGCGAGTCTGAGAATCTAAGCGATCATTCACATCCACCACCACAACAGCAGCTACTCTATAATTTCATGGATAGCCCCACTGTGCCTCAATCACCGTCGGCACCGAGCCTCAACGATGATAGCCGGCGTGTGAAGTTCCTTTGCAGCTTCCTGGGGAGCATAATGCCTCGCCCACAAGATGGGAAGCTGCGATATGTTGGAGGAGAGACGCGAATTGTGAGTGTTCCTAGAGATGTTAGGTATGAGGAGTTGATGGGGAGGATGAGGGAACTGTATGAAGGTGCTGCTGTGTTGAAGTATCAGCAGCCTGATGAGGATCTTGATGCACTTGTCTCTGTTGTGAATGATGATGATGTTGTTAACATGATGGAGGAGTATGACAAGTTGGGGTCTGGAGATGGATTCACTAGGCTTAGGATTTTCTTGTTTTCGCAATTCGAGCAGGATGGTTCCTCACACTTCATTGACGGGGATGACACTGAGAGGAGGTATGTTGATGCTTTGAATAGTTTAAACGATGATATTGGTAGGAAGTTGCAACAATCAGAGTTCACTATGATGAGCCCTGCTGAAGATATCCATGCACAGGAACAGTTCTTTAGTCCAATTAGTGTGGAGAGTGGGGTGCTTGGCCACAGAAACGGGGAACTATCTATGTCGCAGTATAATTTGCATCATCTTGCAATGCAGCAGCAGCAGCAGCAGCAGCAATCTATGGCCCAGAGGTTTAATGAAATAGATGCTCCATGGAATGCTTCCTATTTCTCTCCTAGTCCTAGGCATCATGCTCACCATGACTCAAGATCATTGGTGGAATATCCATCTTCTCCCACTGGTACAAGGTACCGTGTACAATTACCTGAGATACCGGATAAGAGCATTGATAGAGTGCAAGAAGAGTATGCTCGGATTCATGCGAGTCAACATGCTATCTATGACAATCATCAGCAATATTCTGAAAATGTAGTTTGGATGCCAACCAGTGAGAAAGGTTTTCCAGGAAACATTCTTCATGGTGCCCATGTCATGGATGGGAACAGTAGATATGAGCACAGCCGTGTATGTTTTCAGCGAGGTCAACCGCATCCAGCTGCTGAGTGCCAATCAAACAGGGAAAGTTTTGCAGTGAATGCGGATACAAAGTTTCATCCTTTAATCTATCCCAATGAGGAGTCAAGAGGACATTCCTCGGTTACAGGAAGAGTGAATGATCACTATGGCGGTGATGTTCCTCTTACAAATTTCCCCATTGGGCATGGTAGTGTGTCTGATGGACATAACTTATCTTCCAATTATATTCATCAACGAGCTGGACCTGAATTGGGAGCAGAACTTTTCACTGACCAAACTGCAGCTGCAATACCACATCTGAAACTTCCTTCTCTGGAAGAGCGCAGTATGCAGTACAGCAACCCATCTTCTTCCTTTGGAACAGATACTCATTATGCTGTGCCTCGTGGACATGTGCCTGGACATCCTTTCTGGAGGAATGCTCCAACTCCAGTTCATATTGGACCATCATATGAGGCAACTGCTCCACCTAATGGCATGATAAATGCTGGATTGATCAGGGGCGAGGGCAGTCCTGTATTTTTCATTGGACCAGATGGTCAAAATGCTTGGGTAGATCCATCACAGAAATTGTCAGGTCATGATGGATCAGACATCCCAGAACATCCTTTAGTACCTGTGCAGAAACACCCACTTACTGTAGATATTCTTCATCCCCCACAGGACAAAAATTCCGGTATCTACACAGAACATGCGCAGCTGCTAAAATCACCTCTTAATGTGGTTCTGAACCAAGAGATTTCAAGAAATGATACTCATATGACGGAGGCAATGAGTTTGCTGTCTCGAAGTTCGCGTGAAGGAAAAGAGGAGAAATCCGAGGGCATCGTTGAAAACTGTGCTGCACAGATGCAGAACATATCTGTTTCAGTGCAAAATAAAACTTCTGAGAATGCAAGCGGAGCTGCTAATCCTGTTGAGTCTAATAATTCAAACACAAAACCTGCAGCAGAGGTCACAAATGTTGAAAAACTGAGTGATATAGACCCATCTGTTCCAGAAGATTCTGAGCATTTGGTTAATCAATTGAGCTTTTTGCCAGAGTTGATGGCTTCTGTGAAAAAGGCTGCATTAGAAGTTGCTGAGGAGAATGCTCATGGTGATTTAGAATTGGATGCTGAAATTGACCACGTAGATACTTCTAAAATTGAGCCTACAGAGGCCGAGGAAGAAGCAATTGCTAGGGGATTGCAGACAATAAAAAATGATGATTTGGAGGAAATCCGTGAACTAGGTTCTGGAACTTATGGGGCTGTTTATCATGGAAAATGGAAAGGTTCTGATGTTGCCATTAAGAGAATAAAAGCCAGCTGCTTTGCTGGAAGACCTTCTGAAAGAGCTAGATTGATTGCAGATTTCTGGAAAGAGGCATTGATGCTGAGTTCATTGCATCATCCAAATGTTGTCTCTTTCTATGGCATTGTTCGTGATGGCCCTGATGGTTCTTTAGCGACTGTGACGGAATTCATGGTTAATGGATCTTTGAAACAGTTCTTGCATAAGAAAGATAGAACGATAGATCGTCGGAAGAGGCTCATCATAGCTATGGATGCTGCATTTGGGATGGAGTATTTGCATGGAAAGAATATTGTGCATTTTGATTTGAAATGTGAGAATCTATTGGTCAATATGCGAGATCCACAACGTCCTGTCTGCAAGATTGGTGATTTAGGTTTATCAAAGGTTAAACAGCACACACTAGTGTCAGGAGGGGTACGGGGAACATTGCCATGGATGGCACCTGAACTTCTTAGTGGAAAAAGTAATATGGTGTCGGAGAAGATTGATGTTTATTCATTCGGGATAGTCATGTGGGAATTGCTCACGGGGAATGAACCCTATGCTGAGATGCATTGTGCTTCAATAATAGGAGGAATTGTGAACAACACTTTGCGTCCTCAAATCCCGACATGGTGTGATCCTGAGTGGAAAGAGCTACATGTGGAATATCAATACATCAGTGGCTTTTGCAGTTTTGAAGGTGATCAGGTTTGGTGGTAA 3102 0.4387 MCNKGFQCFLGESENLSDHSHPPPQQQLLYNFMDSPTVPQSPSAPSLNDDSRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVPRDVRYEELMGRMRELYEGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQFEQDGSSHFIDGDDTERRYVDALNSLNDDIGRKLQQSEFTMMSPAEDIHAQEQFFSPISVESGVLGHRNGELSMSQYNLHHLAMQQQQQQQQSMAQRFNEIDAPWNASYFSPSPRHHAHHDSRSLVEYPSSPTGTRYRVQLPEIPDKSIDRVQEEYARIHASQHAIYDNHQQYSENVVWMPTSEKGFPGNILHGAHVMDGNSRYEHSRVCFQRGQPHPAAECQSNRESFAVNADTKFHPLIYPNEESRGHSSVTGRVNDHYGGDVPLTNFPIGHGSVSDGHNLSSNYIHQRAGPELGAELFTDQTAAAIPHLKLPSLEERSMQYSNPSSSFGTDTHYAVPRGHVPGHPFWRNAPTPVHIGPSYEATAPPNGMINAGLIRGEGSPVFFIGPDGQNAWVDPSQKLSGHDGSDIPEHPLVPVQKHPLTVDILHPPQDKNSGIYTEHAQLLKSPLNVVLNQEISRNDTHMTEAMSLLSRSSREGKEEKSEGIVENCAAQMQNISVSVQNKTSENASGAANPVESNNSNTKPAAEVTNVEKLSDIDPSVPEDSEHLVNQLSFLPELMASVKKAALEVAEENAHGDLELDAEIDHVDTSKIEPTEAEEEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGNEPYAEMHCASIIGGIVNNTLRPQIPTWCDPEWKELHVEYQYISGFCSFEGDQVWW 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211451g00055 1033 Pfam Protein tyrosine and serine/threonine kinase 773 1013 IPR001245 GO:0004672|GO:0006468
Stsc211451g00055 1033 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 765 859 - -
Stsc211451g00055 1033 MobiDBLite consensus disorder prediction 267 286 - -
Stsc211451g00055 1033 CDD PB1_UP2 57 153 - -
Stsc211451g00055 1033 SUPERFAMILY Protein kinase-like (PK-like) 764 1013 IPR011009 -
Stsc211451g00055 1033 Pfam PB1 domain 69 154 IPR000270 GO:0005515
Stsc211451g00055 1033 Gene3D - 72 156 - -
Stsc211451g00055 1033 PANTHER SERINE-THREONINE PROTEIN KINASE 121 1010 - -
Stsc211451g00055 1033 SMART serkin_6 772 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211451g00055 1033 SUPERFAMILY CAD & PB1 domains 70 158 - -
Stsc211451g00055 1033 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 73 155 - -
Stsc211451g00055 1033 ProSiteProfiles Protein kinase domain profile. 772 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211451g00055 1033 Gene3D Phosphorylase Kinase; domain 1 758 858 - -
Stsc211451g00055 1033 SMART PB1_new 68 153 IPR000270 GO:0005515
Stsc211451g00055 1033 PRINTS Tyrosine kinase catalytic domain signature 891 909 IPR001245 GO:0004672|GO:0006468
Stsc211451g00055 1033 PRINTS Tyrosine kinase catalytic domain signature 854 867 IPR001245 GO:0004672|GO:0006468
Stsc211451g00055 1033 PRINTS Tyrosine kinase catalytic domain signature 962 984 IPR001245 GO:0004672|GO:0006468
Stsc211451g00055 1033 MobiDBLite consensus disorder prediction 660 684 - -
Stsc211451g00055 1033 Gene3D Transferase(Phosphotransferase) domain 1 859 1016 - -
Stsc211451g00055 1033 CDD STKc_MAP3K-like 778 1013 - -
Stsc211451g00055 1033 ProSitePatterns Protein kinases ATP-binding region signature. 778 799 IPR017441 GO:0005524
Stsc211451g00055 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 897 909 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211451g00055 Stsc-Chr211451 369353 375011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211451g00055 48 1013 MAP Kinase Kinase Kinase AT5G57610 52.476 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Stsc211451g00055 PK_Tyr_Ser-Thr 3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211451g00055 - - gmx:100779077 1396.33