Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211451g00054 ATGTGTAATAAAGGGTTTCAATGCTTTCTGGGCGAGTCTGAGATTCTAAGCGATCATTCACATCCACCACAACAACAGCAGCTACTCTATAATTTCATGGATAGCCCCACTGTGCCTCAATCGCCGTCGGCGCCCAGCCTCAACGACGATAGCCGCCGTGTGAAGTTCCTTTGCAGCTTCCTGGGGAGCATAATGCCTCGCCCACAAGATGGGAAGCTGCGCTATGTTGGAGGAGAGACGCGTATTGTGAGTGTTCCAAGAGATGTTAGGTATGAGGAGTTGATGGGGAGGATGAGGGAACTCTATGAAGGTGCTGCTGTGTTGAAGTATCAGCAGCCTGATGAGGATCTTGATGCACTTGTCTCTGTTGTCAATGATGATGATGTTGTTAACATGATGGAGGAGTACGACAAGTTGGGGTCTGGAGATGGGTTCACTAGGCTTAGGATTTTCTTGTTTTCGCAATTCGAGCAGGATGGTTCCTCACACTTCATTGATGGGGATGATACTGAGAGGAGGTATGTTGATGCTTTGAATAGTTTAAATGATGATATTGGTAGGAAGTTGCAACAATCAGAGTTCAATATGATGAGCCCTGTTGAAGATATCCATGCACCGGAACAGTTCTTTAGTCCAGTTAGTGTGGAGAGTGGGGTGCTTGGCCACAGAAATGGGGAACTATCCATTTCGCAGTATAATTTGCATCATCTTGCAATGCAGCAGCAGCAGCAGCAATCTATGGCCCAGAGGTTTAATGAAATTGATGCTCCATGGAATGCTTCCTATTTCTCTCCTAGTCCTAGGCATCATGCTCACCATGACTCAAGATCATTGGTGGAATATCCATCTTCTCCCACGGGTACAAGGTACCGTGTACAATTACCTGAGATACAGGATAAGAGCATTGATAGAGTGCAAGAAGAGTATGCTCGGATTCATGCGAGTCAACATCCTATCTATGACAATCATCAGCAATATTCCGAAAATGTAGTTTGGATGCCAACCAGTGAGAAAGGTTTTCCAGGAAACATTATTCATGGTGCCCATGTCATGGATGGGAACAGTAGATATGAGCACAACCGTGTATGTTTTCAGCGAGGTCAACCGCATCCATCTGCCGAGTGCCAATCAAACAGGGAAAGCTTTGCAGTGAATGCGGATACAAAGTTTCATCCTGGAATCTATCCCAATGAGGAGTCAAGAGGACATGCCTCGATTACAGGAAGAGTGAATGATCACTATGGCGGTGATGTTCCTGTTACAAATTTCTCCATTGGTGGTAGTGTGTCTGATGGACATAACTTATCTTCCAATTATATTCATCAACGAGCTGGACCTGAATTGGGGGCAGAACTTTTCACTGACCAAACTGCAGCTGCTATACCACATCTGAAACTTCCTTCTCTGGAAGAGCTCAGTATGCAGTACAGCAACCCATCTTCTTCCTTTGGAACAGATACTCATTATGCTGTGCCTCGTGGACATGTGCCTGGACATCCTTTCTGGAGAAACACTCCAAGTCCAGTTCATATTGGACCATCATATGAGGCAACTGCTCCACCTAATGGCATGATAAATGCTGGATTGATCAGAGGCGAGGGCAGTCCTGTGTTTTTCATTGGACCAGATGGTCAAAATGCTTGGGTGGATCCCTCACAGAAATTGTCAGGTCATGATGGGTCAGACGTCCCAGAACATCCTTTAGCACATGTGCAGAAACACCCACTTACTGTAGATATTCTTCATACCCCACAGGACAAAAATTCCGGTATCTACACAGAACATGCGCAGCTGCTAAAATCACCTCTTAATGTGGTTCTGAACCAAGAGATTTCAAGAAATGATACTCATATGACGGAGGCAATGAGTTTGCTGTCTCGAAGTTCGCGTGAAGGAAAAGAGGAGAAATCCGAGGGTATCGTTGAAAACTGTGCTGCACAGATGCAGAACATGTCTTTTTCAGTGCAAAATAAAACTTCTGAGATTGTAAACGGAGCTGCTAATCCTGTTGAGTCTAATAATTCAAACGCAAAACCTGCAGCAGAGGTCGCAAATGTTGAAAAACTGAGTGATATAGACCCATCTCTTCCGGAAGATTCTAAGCAGTTGGTAGATCAATTCAGCTTTTTGCCTGAGTTGATGGCTTCTGTGAAAAAGGCTGCATTAGAAGTTGCTGAGGAGGTGAAAGTTACAGGTTGCATGCAGCCCGAGTCTGAGATACAGAATTCACCTCCTAATGAAGATACAACTAATGAAGTTGAACCAATGGTGAGGATGAAGTCTCCCATTGCAGACCCAAAATCAAAGGGAGTTGTCCATGGTATGACACTTGACACAAGTGAGAAACAGTTGGCTCTTCTATACCTGGCAACTTTGCAGGGCATTGCATATGGAACACGTCACATTGTAGAGCATTGCAATGCACATGGTCACAAAATCAACACTCTACTTTCATGCGGTGGGCTTTCAAAGAACCCTATATTCATTCAGGAACATGCTGATATTATTGGTTACCCTATAATTCTTCCAAGGGAAAGTGAGTCCGTGCTATTGGGTGCTGCTATTCTGGGTGCTGTTGCTACAAGGAAATATCATAGCCTTAGTGAGGCCATGAGAGCCCTGAATGCACCGGGTCAGGTGATTCATCCATCTAATGATCCAAGGGTTAAAAAGTACCATGATGCCAAGTATAAGATCTTCCGTGGCCTCTATGAACAGCAGCTTACTAATCGTTCTATCATGGCTCAAGCCTTGGCATAG 2760 0.4475 MCNKGFQCFLGESEILSDHSHPPQQQQLLYNFMDSPTVPQSPSAPSLNDDSRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVPRDVRYEELMGRMRELYEGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQFEQDGSSHFIDGDDTERRYVDALNSLNDDIGRKLQQSEFNMMSPVEDIHAPEQFFSPVSVESGVLGHRNGELSISQYNLHHLAMQQQQQQSMAQRFNEIDAPWNASYFSPSPRHHAHHDSRSLVEYPSSPTGTRYRVQLPEIQDKSIDRVQEEYARIHASQHPIYDNHQQYSENVVWMPTSEKGFPGNIIHGAHVMDGNSRYEHNRVCFQRGQPHPSAECQSNRESFAVNADTKFHPGIYPNEESRGHASITGRVNDHYGGDVPVTNFSIGGSVSDGHNLSSNYIHQRAGPELGAELFTDQTAAAIPHLKLPSLEELSMQYSNPSSSFGTDTHYAVPRGHVPGHPFWRNTPSPVHIGPSYEATAPPNGMINAGLIRGEGSPVFFIGPDGQNAWVDPSQKLSGHDGSDVPEHPLAHVQKHPLTVDILHTPQDKNSGIYTEHAQLLKSPLNVVLNQEISRNDTHMTEAMSLLSRSSREGKEEKSEGIVENCAAQMQNMSFSVQNKTSEIVNGAANPVESNNSNAKPAAEVANVEKLSDIDPSLPEDSKQLVDQFSFLPELMASVKKAALEVAEEVKVTGCMQPESEIQNSPPNEDTTNEVEPMVRMKSPIADPKSKGVVHGMTLDTSEKQLALLYLATLQGIAYGTRHIVEHCNAHGHKINTLLSCGGLSKNPIFIQEHADIIGYPIILPRESESVLLGAAILGAVATRKYHSLSEAMRALNAPGQVIHPSNDPRVKKYHDAKYKIFRGLYEQQLTNRSIMAQALA 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211451g00054 919 CDD PB1_UP2 57 153 - -
Stsc211451g00054 919 Pfam FGGY family of carbohydrate kinases, C-terminal domain 758 860 IPR018485 GO:0005975|GO:0016301
Stsc211451g00054 919 SUPERFAMILY CAD & PB1 domains 70 158 - -
Stsc211451g00054 919 Gene3D - 705 917 - -
Stsc211451g00054 919 PANTHER RIBULOKINASE 760 916 - -
Stsc211451g00054 919 SMART PB1_new 68 153 IPR000270 GO:0005515
Stsc211451g00054 919 Gene3D - 72 156 - -
Stsc211451g00054 919 MobiDBLite consensus disorder prediction 265 284 - -
Stsc211451g00054 919 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 73 155 - -
Stsc211451g00054 919 Pfam PB1 domain 69 154 IPR000270 GO:0005515
Stsc211451g00054 919 SUPERFAMILY Actin-like ATPase domain 739 907 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211451g00054 Stsc-Chr211451 363513 367593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211451g00054 48 730 MAP Kinase Kinase Kinase AT5G57610 41.114 4.51e-143 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211451g00054 - - gmx:100779077 867.84