Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211451g00007 ATGGTGAGGCCTAATGAGCCAACATGGTGTGGTAGATTACCACTATCGGAATGGGACCAAATAGGAACCATAACACATGTTCCCACCATCTACTTCTATCGTTCCCCTCAAACCTTAAACATTTCCACCATTTCCAACACCTTGAAGGACTCCTTAAGTCGTGCCTTGGTGCCATTTTATCCCTTGGCCGGCCGTTTACACTGGATAGAGAACGGCCGTCTTGAGCTCCAATGCAACGCCATTGGAGCTCAATTCATTGAAGCTGAATCGTCATCAACCCTCGAAGAGGTTGGTGACTTGTCCCTTTCATCGGAGTATCTATACCATCTTTCTCCGAACGTGGACTATACACTCCCCATTCATGAGTTGCCATTGGTCATTGTTCAACTCACGACGTTCAAGTGCGGTGGATTTGGCCTCAGCTTGGCAATTTCTCATGCCGTCGCCGATGGACAAAGTGCGTTGCATTTTATCAACGAGTGGTCGAGGTTCGCCCGCGGCGAGACCTTGGAAATGGTGCCGTTTCTTGATAGGAAAGTCTTGCGTGCCGGGGAACCACCTTTGGCGCCGCCGTTGCCAGCCGCCTGCCACAGCCGCTCGGAGTTCGAACACCCTCCGTTATTGCTTGGGCAGTCTACCAACATGGAGCAGAGGAAAAAGAAAACCACGGTGGCCATTTTCAAGTTGAGCAAACAACAAGTTGATGGCTTGAGGAATTTGGCAAATCTCAGTTGGGGTAACCCTAGCAATGGACGTGGTTATACAAGGTACGAAACAGTAGCTGGGCACGTGTGGAGATGTGCATGCAAGGCAAGGGAACACAAAGTTGAGCAACCAACGTGTTTAGGTGTGTGTGTGGATTCGAGGTGTCGCATGAAGCCGCCATTGCCAAAAGGGTACTTCGGTAACGCAACCTTGGACGTGGTTGCAACCTCTCTTTCAGGTGACTTGGTTTCAAGGCCATTAGGGTATGCATCAAGCAGAATAAGGGAAGCCATTGAGAAGGTGAATGATGAGTACATAAAGTCAGAGATTGAGTTCTTGAAGAACCAAAAGGATTTGAGCAGGTTTCAAGATCTTCATGCTATAAGTAGTGACAAGGGTCCATTCTATGGTAACCCTAACATGGGTGTGGTTAGTTGGTTGACTTTGCCGGTCAACGGGCTTGACTTTGGATGGGGTAAAGAGGTTCAAATGTATCCAGGGACACATGAATTTGATGGTGATTCTGTTCTTCTTCCTGGTCTTGATGGTGATGGTTCTATTGTTCTTGCTATATGTTTGCAAGTTGATCATATGGCTGCATTTAAGAAGCTTTTCTACCAAGAAGATCAGATCAATCATGCTAATTATGTTAATGTATGA 1365 0.4718 MVRPNEPTWCGRLPLSEWDQIGTITHVPTIYFYRSPQTLNISTISNTLKDSLSRALVPFYPLAGRLHWIENGRLELQCNAIGAQFIEAESSSTLEEVGDLSLSSEYLYHLSPNVDYTLPIHELPLVIVQLTTFKCGGFGLSLAISHAVADGQSALHFINEWSRFARGETLEMVPFLDRKVLRAGEPPLAPPLPAACHSRSEFEHPPLLLGQSTNMEQRKKKTTVAIFKLSKQQVDGLRNLANLSWGNPSNGRGYTRYETVAGHVWRCACKAREHKVEQPTCLGVCVDSRCRMKPPLPKGYFGNATLDVVATSLSGDLVSRPLGYASSRIREAIEKVNDEYIKSEIEFLKNQKDLSRFQDLHAISSDKGPFYGNPNMGVVSWLTLPVNGLDFGWGKEVQMYPGTHEFDGDSVLLPGLDGDGSIVLAICLQVDHMAAFKKLFYQEDQINHANYVNV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211451g00007 454 FunFam Tryptamine hydroxycinnamoyl transferase 210 441 - -
Stsc211451g00007 454 Gene3D - 1 198 IPR023213 -
Stsc211451g00007 454 Gene3D - 211 443 IPR023213 -
Stsc211451g00007 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 440 - -
Stsc211451g00007 454 Pfam Transferase family 1 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211451g00007 Stsc-Chr211451 45016 46969 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211451g00007 1 442 Monolignol Biosynthesis Gene Families AT5G48930 38.600 7.44e-104 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211451g00007 K13065 - gmx:100777007 635.565