Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211450g00076 ATGGAGTTGCTACGTATTTTGTTATCTTCCATTTGTTTGTTGCTTGTGATTGAGAACTGGCAAGGAAACGCAGAACCCGTGGAGGATAAGCAAGCTTTGCTTGATTTTGTGAACAGATTCCCTCCTTCAAGACCTCTGAATTGGGATGAGTCCTCCTCTATGTGTGCCAATTGGACCGGAGTCACTTGCAATGAAGATGACTCCCGGGTCATCGCCATTCGCCTGCCGGGGGTTGGATTTCACGGCACTATTCCGCCGGATACTATTAGCCGCCTCTCGGCGCTACAAACTTTGAGCCTCAGATCCAATGTCATAACTGGCCGGATACCTTCTGACTTTTCTAAGTTGAAGAACTTAACTTTGCTGTATCTTCAGTTCAACAATTTCTCTGGTCCTTTGCCTGATTTCTCAGTTTGGAAGAATCTTACTATTGTCAATTTGTCCAATAACCATTTCAATGGCAGCATTCCTGATTCACTTTCCAATTTGACCGGGCTTGCTGGTTTGAACCTTGCAAACAACTCGCTTTCTGGTGAAATTCCCAATCTCCAGTTGCCAAGACTACAGCTGCTGAATCTGTCTAACAACAATTTGCATGGGAGTGTGCCTAAATCCCTCCAGAGGTTTCCCGATTCGTCGTTCTTTGGAAATAATGTTTCTCTTGGGAGCTCTGCTGTTGTTCCGCCGGTGCCTCCTCCGCTGTATGGGCCTTCTTCGAGATCTAAGAAGCATAGAAGGCTCAGCGAAACAGCGCTACTGGGAATTACTATTGCCTGTGGTGTTCTAGGCCTTTTGGCATTTGTTTTCCTAATCTTTGTATGCTGCTCAAGAAGGAGGGGTGAAGAAGATGATGATGCCTTCAATGGGAAGTTGCAGAAGGGTGACATGTCTCCGGAGAAAGCTGTCTCGAGGAACCAGGATGCGAATAATAAGCTGGCTTTCTTTGAGGGATGTAATTATGCCTTTGATTTGGAGGATTTACTCAGGGCTTCTGCTGAGGTACTGGGAAAGGGAACATTTGGTACTGCATACAAGGCAATACTGGAAGATGCAACCACAGTTGTTGTGAAGAGGTTAAAGGAGGTAGCAGCTGGAAAGAAGGATTTTGAACAACACATGGAAATAGTAGGAAGCCTTAAACATGAGAATGTGGTTGAGCTCAAGGCATATTACTATTCCAAAGATGAGAAACTAATGGTATATGATTACTATAGCCAGGGCAGCGTCTCTTCAATGTTACACGGCAAAAGAGGAGAGGAAAGAGTGGGTCTAGATTGGGATACTCGGCTGAAAATAGCCCTAGGTGCTGCAAGAGGCATTGCTCGTATCCATCTTGAGAATGGAGGCAAGCTTGTACACGGCAACATCAAATCCTCAAATATCTTTCTCAATGGCAAACAGTATGGTTGTGTATCTGACCTTGGTCTCGCATCCATAATGAGCTCACTTGCCCTACCCATCTCGCGGGCTGCTGGTTACCGAGCACCTGAAGTTACGGACACCAGGAAAGCAGCACAACCTTCAGATGTTTACAGCTTTGGCGTGGTGTTACTTGAGCTTCTGACAGGGAAATCCCCTATCCACACAACTGGTGGGGATGAGATTATCCACCTGGTGAGATGGGTTCATTCAGTTGTGCGAGAGGAGTGGACAGCCGAGGTGTTTGACTTAGAGCTGATGAGGTATCCAAATATAGAGGAAGAGATGGTGGAAATGCTACAGATAGCTATGTCATGCGTCGTAAGGATGCCGGATCAGAGACCAAAGATGTCTGAAGTTGTGAAGATGATAGAAAATGTGAGGCAAATTGATGCAGAGACTCAGCCGTCATCGGACACCCAAGCAGAACAGAAAATACCCTGTGACGTCGATATTTCCCCTTCTTCCTCTCCCTCCCCCTTACCAAAAGGAAGCGAATGA 1920 0.4615 MELLRILLSSICLLLVIENWQGNAEPVEDKQALLDFVNRFPPSRPLNWDESSSMCANWTGVTCNEDDSRVIAIRLPGVGFHGTIPPDTISRLSALQTLSLRSNVITGRIPSDFSKLKNLTLLYLQFNNFSGPLPDFSVWKNLTIVNLSNNHFNGSIPDSLSNLTGLAGLNLANNSLSGEIPNLQLPRLQLLNLSNNNLHGSVPKSLQRFPDSSFFGNNVSLGSSAVVPPVPPPLYGPSSRSKKHRRLSETALLGITIACGVLGLLAFVFLIFVCCSRRRGEEDDDAFNGKLQKGDMSPEKAVSRNQDANNKLAFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAAGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVYDYYSQGSVSSMLHGKRGEERVGLDWDTRLKIALGAARGIARIHLENGGKLVHGNIKSSNIFLNGKQYGCVSDLGLASIMSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDAETQPSSDTQAEQKIPCDVDISPSSSPSPLPKGSE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211450g00076 639 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Stsc211450g00076 639 SUPERFAMILY L domain-like 39 209 - -
Stsc211450g00076 639 Gene3D Phosphorylase Kinase; domain 1 295 403 - -
Stsc211450g00076 639 Pfam Protein kinase domain 332 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211450g00076 639 SUPERFAMILY Protein kinase-like (PK-like) 333 597 IPR011009 -
Stsc211450g00076 639 Gene3D Transferase(Phosphotransferase) domain 1 405 624 - -
Stsc211450g00076 639 Gene3D Ribonuclease Inhibitor 137 226 IPR032675 -
Stsc211450g00076 639 ProSiteProfiles Protein kinase domain profile. 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211450g00076 639 FunFam Probable inactive receptor kinase RLK902 26 184 - -
Stsc211450g00076 639 PANTHER OS05G0588300 PROTEIN 5 611 - -
Stsc211450g00076 639 ProSitePatterns Protein kinases ATP-binding region signature. 335 366 IPR017441 GO:0005524
Stsc211450g00076 639 Gene3D Ribonuclease Inhibitor 28 136 IPR032675 -
Stsc211450g00076 639 MobiDBLite consensus disorder prediction 603 639 - -
Stsc211450g00076 639 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Stsc211450g00076 639 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Stsc211450g00076 639 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 404 611 - -
Stsc211450g00076 639 Pfam Leucine rich repeat 83 129 IPR001611 GO:0005515
Stsc211450g00076 639 FunFam pollen receptor-like kinase 1 298 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211450g00076 Stsc-Chr211450 539816 543333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211450g00076 1 616 Receptor kinase-like Gene Family AT4G23740 66.507 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc211450g00076 Pkinase 4.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211450g00076 - - gmx:100804799 987.252