Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211450g00076 | ATGGAGTTGCTACGTATTTTGTTATCTTCCATTTGTTTGTTGCTTGTGATTGAGAACTGGCAAGGAAACGCAGAACCCGTGGAGGATAAGCAAGCTTTGCTTGATTTTGTGAACAGATTCCCTCCTTCAAGACCTCTGAATTGGGATGAGTCCTCCTCTATGTGTGCCAATTGGACCGGAGTCACTTGCAATGAAGATGACTCCCGGGTCATCGCCATTCGCCTGCCGGGGGTTGGATTTCACGGCACTATTCCGCCGGATACTATTAGCCGCCTCTCGGCGCTACAAACTTTGAGCCTCAGATCCAATGTCATAACTGGCCGGATACCTTCTGACTTTTCTAAGTTGAAGAACTTAACTTTGCTGTATCTTCAGTTCAACAATTTCTCTGGTCCTTTGCCTGATTTCTCAGTTTGGAAGAATCTTACTATTGTCAATTTGTCCAATAACCATTTCAATGGCAGCATTCCTGATTCACTTTCCAATTTGACCGGGCTTGCTGGTTTGAACCTTGCAAACAACTCGCTTTCTGGTGAAATTCCCAATCTCCAGTTGCCAAGACTACAGCTGCTGAATCTGTCTAACAACAATTTGCATGGGAGTGTGCCTAAATCCCTCCAGAGGTTTCCCGATTCGTCGTTCTTTGGAAATAATGTTTCTCTTGGGAGCTCTGCTGTTGTTCCGCCGGTGCCTCCTCCGCTGTATGGGCCTTCTTCGAGATCTAAGAAGCATAGAAGGCTCAGCGAAACAGCGCTACTGGGAATTACTATTGCCTGTGGTGTTCTAGGCCTTTTGGCATTTGTTTTCCTAATCTTTGTATGCTGCTCAAGAAGGAGGGGTGAAGAAGATGATGATGCCTTCAATGGGAAGTTGCAGAAGGGTGACATGTCTCCGGAGAAAGCTGTCTCGAGGAACCAGGATGCGAATAATAAGCTGGCTTTCTTTGAGGGATGTAATTATGCCTTTGATTTGGAGGATTTACTCAGGGCTTCTGCTGAGGTACTGGGAAAGGGAACATTTGGTACTGCATACAAGGCAATACTGGAAGATGCAACCACAGTTGTTGTGAAGAGGTTAAAGGAGGTAGCAGCTGGAAAGAAGGATTTTGAACAACACATGGAAATAGTAGGAAGCCTTAAACATGAGAATGTGGTTGAGCTCAAGGCATATTACTATTCCAAAGATGAGAAACTAATGGTATATGATTACTATAGCCAGGGCAGCGTCTCTTCAATGTTACACGGCAAAAGAGGAGAGGAAAGAGTGGGTCTAGATTGGGATACTCGGCTGAAAATAGCCCTAGGTGCTGCAAGAGGCATTGCTCGTATCCATCTTGAGAATGGAGGCAAGCTTGTACACGGCAACATCAAATCCTCAAATATCTTTCTCAATGGCAAACAGTATGGTTGTGTATCTGACCTTGGTCTCGCATCCATAATGAGCTCACTTGCCCTACCCATCTCGCGGGCTGCTGGTTACCGAGCACCTGAAGTTACGGACACCAGGAAAGCAGCACAACCTTCAGATGTTTACAGCTTTGGCGTGGTGTTACTTGAGCTTCTGACAGGGAAATCCCCTATCCACACAACTGGTGGGGATGAGATTATCCACCTGGTGAGATGGGTTCATTCAGTTGTGCGAGAGGAGTGGACAGCCGAGGTGTTTGACTTAGAGCTGATGAGGTATCCAAATATAGAGGAAGAGATGGTGGAAATGCTACAGATAGCTATGTCATGCGTCGTAAGGATGCCGGATCAGAGACCAAAGATGTCTGAAGTTGTGAAGATGATAGAAAATGTGAGGCAAATTGATGCAGAGACTCAGCCGTCATCGGACACCCAAGCAGAACAGAAAATACCCTGTGACGTCGATATTTCCCCTTCTTCCTCTCCCTCCCCCTTACCAAAAGGAAGCGAATGA | 1920 | 0.4615 | MELLRILLSSICLLLVIENWQGNAEPVEDKQALLDFVNRFPPSRPLNWDESSSMCANWTGVTCNEDDSRVIAIRLPGVGFHGTIPPDTISRLSALQTLSLRSNVITGRIPSDFSKLKNLTLLYLQFNNFSGPLPDFSVWKNLTIVNLSNNHFNGSIPDSLSNLTGLAGLNLANNSLSGEIPNLQLPRLQLLNLSNNNLHGSVPKSLQRFPDSSFFGNNVSLGSSAVVPPVPPPLYGPSSRSKKHRRLSETALLGITIACGVLGLLAFVFLIFVCCSRRRGEEDDDAFNGKLQKGDMSPEKAVSRNQDANNKLAFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAAGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVYDYYSQGSVSSMLHGKRGEERVGLDWDTRLKIALGAARGIARIHLENGGKLVHGNIKSSNIFLNGKQYGCVSDLGLASIMSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDAETQPSSDTQAEQKIPCDVDISPSSSPSPLPKGSE | 639 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211450g00076 | 639 | Pfam | Leucine rich repeat N-terminal domain | 28 | 64 | IPR013210 | - | |
Stsc211450g00076 | 639 | SUPERFAMILY | L domain-like | 39 | 209 | - | - | |
Stsc211450g00076 | 639 | Gene3D | Phosphorylase Kinase; domain 1 | 295 | 403 | - | - | |
Stsc211450g00076 | 639 | Pfam | Protein kinase domain | 332 | 595 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211450g00076 | 639 | SUPERFAMILY | Protein kinase-like (PK-like) | 333 | 597 | IPR011009 | - | |
Stsc211450g00076 | 639 | Gene3D | Transferase(Phosphotransferase) domain 1 | 405 | 624 | - | - | |
Stsc211450g00076 | 639 | Gene3D | Ribonuclease Inhibitor | 137 | 226 | IPR032675 | - | |
Stsc211450g00076 | 639 | ProSiteProfiles | Protein kinase domain profile. | 329 | 600 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211450g00076 | 639 | FunFam | Probable inactive receptor kinase RLK902 | 26 | 184 | - | - | |
Stsc211450g00076 | 639 | PANTHER | OS05G0588300 PROTEIN | 5 | 611 | - | - | |
Stsc211450g00076 | 639 | ProSitePatterns | Protein kinases ATP-binding region signature. | 335 | 366 | IPR017441 | GO:0005524 | |
Stsc211450g00076 | 639 | Gene3D | Ribonuclease Inhibitor | 28 | 136 | IPR032675 | - | |
Stsc211450g00076 | 639 | MobiDBLite | consensus disorder prediction | 603 | 639 | - | - | |
Stsc211450g00076 | 639 | Pfam | Leucine Rich Repeat | 141 | 163 | IPR001611 | GO:0005515 | |
Stsc211450g00076 | 639 | Pfam | Leucine Rich Repeat | 187 | 208 | IPR001611 | GO:0005515 | |
Stsc211450g00076 | 639 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 404 | 611 | - | - | |
Stsc211450g00076 | 639 | Pfam | Leucine rich repeat | 83 | 129 | IPR001611 | GO:0005515 | |
Stsc211450g00076 | 639 | FunFam | pollen receptor-like kinase 1 | 298 | 403 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211450g00076 | Stsc-Chr211450 | 539816 | 543333 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211450g00076 | 1 | 616 | Receptor kinase-like Gene Family | AT4G23740 | 66.507 | 0.0 | 797 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Stsc211450g00076 | Pkinase | 4.5e-35 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211450g00076 | - | - | gmx:100804799 | 987.252 |