Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211450g00071 ATGGGTTCAAACAGTAAAGGATGCCCCGCAGGAATGAAAGCGACGTCGAATGGGGTGTTTCAGGGAGACAATCCCCTTGACTACGCACTCCCTCTTGCTATCTTACAAATCTGCATGGTGGTGCTCCTCACTCGCCTCCTTGCCTTCCTTCTCAAGCCAATAAGGCAACCTCGTGTCATCGCAGAAATTGTAGGTGGAATCTTGCTCGGTCCATCAGCTCTTGGACGCAGCAACGCCTTTCTGAACGCGCTCTTCCCATCCAAGAGCCTAACCGTTTTGGACACTCTGGCCAACATCGGTCTACTTTTCTTCATGTTCCTCGTAGGACTCGAGCTCGACCCCAAGTCCCTCATTAGCAAAACAGGAAAGAAAGCTCTTGCCATTGCCCTCGCAGGGATCACGTTCCCCTTCGTCTTGGGAATCGGGACATCTTTTGCCCTTCGCGCAACCATCTCTGAGGGTGTAGATAAAGCACCTTTCTTTGTGTTCATGGGAGTCGCACTCTCCATCACCGCATTCCCCGTTCTCGCACGCATCTTGGCTGAGTTGAGACTCCTTACAACTGATGTTGGAAGGATGGCCATGTCAGCAGCGGCTGTCAATGACGTGGCAGCGTGGATTCTTCTCGCCCTTGCAATTGCACTCTCTGGCTCTCACTCTTCTCCACTTGTCTCTGTTTGGGTCCTCCTCTCTGGATGCGGCTTTGTAATCTGTTGTGCACTTGTTCTTCCTCCAATCTTCAAATGGATGTCTCAGCGCTGCTCTGAAGGCGAAGCCGTCAACGAGTCCTATGTGTGTGCCACCTTGGCTACGGTATTGGCAGCTGGTTTTGTGACAGACACCATTGGAATCCATGCTCTGTTTGGGGCTTTTGTCGTTGGAGTTGTTCTTCCTAAGGAAGGCCCTTTTGCTGCTGCTCTTGTTGAGAAGGTTGAGGATCTTGTCTCTGGTCTCTTCCTTCCGTTGTACTTTGTGTCCAGTGGACTCAAGACAAATGTAGCCACCATTCGTGGTCTTAAGTCCTGGGGGCTCCTTCTTTTGGTCATATTCAATGCTTGCTTCGGTAAGATTGTTGGTACCGTTGTCGTCTCCTTCCTTTGTAGGGTGCCATTTCAAGAATCATTGGCTCTCGGCTTTCTCATGAATACTAAGGGATTGGTAGAGCTCATCGTCCTCAACATCGGTAAAGACAGGAAGGTATTAAATGACCAAACCTTTGCAATTATGGTGCTGATGGCTATCTTCACAACGTTCATCACGACGCCTTTGGTGATGGCAGTTTATAAACCGGCCAAGAGAATGGCTAAGGCTGACTACAAATACAGAACAGTTAAGAGGAAAAACCCGGACACTCAACTGAGACTCATGGTGTGTTTCCACAGCACAAGGAACATCCCTTCAATGTTAAATCTGATTGAAGCCTCGCGCGGCACTGAAAAGAGGGAAGGCCTTTGCATATACGCGTTGCACCTCATGGAGCTCACTGAAAGGCCTTCTGCTATATTGATGGTCCACAAAACCAGAAAGAATGGATTACCCTTTTGGAACAAAGTCCACCATAATAACAACCATCACTCAGATGCTAATCAAATAGTGATAGCTTTTGAGGCTATGGAGCAGCTAAGCAGAGTGTCGATTCGCCCCATGACTGCAATCTCACCCATTCCCAACATTCACGATGACATATGCGCCTGTGCTGAGAGCAAGAGGGTTGCAATGGTGATTCTGCCGTTTCACAAGCACCCAAGGGTTGATGGAACGTGGGAAACAACGAGAAGTGAATTCAGGTGCGTGAATAAGAGAGTTCTCGAGCATGCACCCTGCTCTGTAGGGATCTTGGTGGACCGGGGGCTTGGTGGGACCACCCACGTGGCAGCAAGTAACGTTTCATCTTCAATGACCATGCTCTTCTTTGGAGGCAACGACGATCAAGAGGCGCTTGCTTATGCTTTGAGAATGGCAGAGCATCCTGGTATCAATCTAACCATAGTGCACCTGATAGTGAGGTCCGAGGATGTTGGAGACGTTGTCAGTGTCGTAGATATAAACGACAACCCATCATCAACGGATGAGATGGTTCTTTCTGAGGTGAAAACAAATATTTGTGGAAAGAGTTCATCCATAAAGTTTGAAGAGAGAGGCGTGAAAAGCCTGGGTGAGATAATTGAGGTGGTTGGAGAGTACAGCAGAGGATGCAACTTGTTTGTGGTTGGTAGGATGCCCAAAGGACACGTGGCGGTCACTTTGAACAATGTGAAATGCGAGTGTCCAGAATTGGGCCCACTCTGCAACTTGTTGACCTCTCCGGAACTGGTCTCAATTTCAGCTTCGGTTTTGGTCGTGCAACACTATCATGCTCTCTGA 2364 0.4882 MGSNSKGCPAGMKATSNGVFQGDNPLDYALPLAILQICMVVLLTRLLAFLLKPIRQPRVIAEIVGGILLGPSALGRSNAFLNALFPSKSLTVLDTLANIGLLFFMFLVGLELDPKSLISKTGKKALAIALAGITFPFVLGIGTSFALRATISEGVDKAPFFVFMGVALSITAFPVLARILAELRLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSHSSPLVSVWVLLSGCGFVICCALVLPPIFKWMSQRCSEGEAVNESYVCATLATVLAAGFVTDTIGIHALFGAFVVGVVLPKEGPFAAALVEKVEDLVSGLFLPLYFVSSGLKTNVATIRGLKSWGLLLLVIFNACFGKIVGTVVVSFLCRVPFQESLALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPLVMAVYKPAKRMAKADYKYRTVKRKNPDTQLRLMVCFHSTRNIPSMLNLIEASRGTEKREGLCIYALHLMELTERPSAILMVHKTRKNGLPFWNKVHHNNNHHSDANQIVIAFEAMEQLSRVSIRPMTAISPIPNIHDDICACAESKRVAMVILPFHKHPRVDGTWETTRSEFRCVNKRVLEHAPCSVGILVDRGLGGTTHVAASNVSSSMTMLFFGGNDDQEALAYALRMAEHPGINLTIVHLIVRSEDVGDVVSVVDINDNPSSTDEMVLSEVKTNICGKSSSIKFEERGVKSLGEIIEVVGEYSRGCNLFVVGRMPKGHVAVTLNNVKCECPELGPLCNLLTSPELVSISASVLVVQHYHAL 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211450g00071 787 Gene3D - 32 438 IPR038770 -
Stsc211450g00071 787 PANTHER CATION/H + ANTIPORTER 7 785 - -
Stsc211450g00071 787 Pfam Sodium/hydrogen exchanger family 39 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc211450g00071 787 Gene3D - 476 749 - -
Stsc211450g00071 787 FunFam Cation/H(+) antiporter 15 32 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211450g00071 Stsc-Chr211450 501758 504229 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211450g00071 1 786 Antiporter Super Family AT4G23700 68.165 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211450g00071 K26731 - qsa:O6P43_034301 1133.63