Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211450g00049 ATGGACGAGCTTGCTTACTTCATGGACTGGGATCTGGAATCCATTCTGAGAGGCTGCCCATCATCAACTGCCACGGATCCAAACCCTAGTTTCCTTCTTCATCAAGAAGATTATGACCTACTTTTCAGTACTAGTTTTCCTGAATTCTCAGAAACCACAAGGGTCCTTGATGAATTGGACCACCTTTACAAGCCTTTCTACCCAGTTTTCCACACTAATAATATTCAAAATAATCCCCTACCATTACCCGAAGATCCCGTCAAACAAGACTTGCAAGTTCCCACATCAGTTTCTAAACCTAAAAAAAGCAAGAAGAACACAAAGAAGAGGGAAGTGAAGGAGGTTATGGCGGCGGAAATTAGTGTTTGCGACGCATGGGCGTGGCGAAAATATGGACAGAAACCTATAAAGGGGTCGCCATACCCACGGAGCTATTACAGATGCAGCAGTTCGAAAGGATGCTTGGCGAGGAAACAAGTTGAAAGAAACCATTTGGATCCAACGCTTTTCTTGGTTACCTACTCCGCCGAGCACAACCATCCCTACCCTACTCGCCGCAACTCTCTCGCAGGAATTTCACGCAAGAATAATAACCACAACTCCTTAACAACTGCTGCTCCCATCGTCACTGATGCTACTTGCTCTTCTTCTTCGAATTCCTCGTCCATGGAAGAAGAAGATAAGGGATTATTATTCAAGAAGGAGCCTGATGAACTACTACTTCATCCCCAAGCTGCTGAATTTGGTGATGTTAATTGGTTTACAGACACAGACATGGACCATGAATTTATGAGGCTTAATGAACAAGAACTTGCATTACACGGTGGTGGTAGTGATTTCGTTGTTGGTAATTATTAA 858 0.4371 MDELAYFMDWDLESILRGCPSSTATDPNPSFLLHQEDYDLLFSTSFPEFSETTRVLDELDHLYKPFYPVFHTNNIQNNPLPLPEDPVKQDLQVPTSVSKPKKSKKNTKKREVKEVMAAEISVCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNHLDPTLFLVTYSAEHNHPYPTRRNSLAGISRKNNNHNSLTTAAPIVTDATCSSSSNSSSMEEEDKGLLFKKEPDELLLHPQAAEFGDVNWFTDTDMDHEFMRLNEQELALHGGGSDFVVGNY 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211450g00049 285 Gene3D WRKY domain 105 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211450g00049 285 SUPERFAMILY WRKY DNA-binding domain 121 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211450g00049 285 SMART WRKY_cls 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211450g00049 285 MobiDBLite consensus disorder prediction 78 110 - -
Stsc211450g00049 285 Pfam WRKY DNA -binding domain 124 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211450g00049 285 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 86 225 IPR044810 GO:0003700
Stsc211450g00049 285 ProSiteProfiles WRKY domain profile. 117 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211450g00049 Stsc-Chr211450 305256 306518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211450g00049 1 219 WRKY Transcription Factor Family AT4G23550 47.131 3.64e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211450g00049 WRKY 5.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211450g00049 K13426 K13425 gmx:102663255 231.876