Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211450g00029 ATGGCCACTGCTGATGGAGAGCTTGCTTTTTTCAGTGACCCTTTTCCTTTCGACGAGGCCACTACTCTTTGTTCTTCTACTTCTGTTGACCCTTTTTCATCTTGCTTCTTTTCTTTCTCTCCTCCAAGTACGCACTTAGAAAACCTCACCCTTCAGGCCAATAGCAGCAACAACAACCGTCTTATTGCTCCCACTTTGGAGACTGATTTTGCAAGCTTCTCATCATCGGGTTTTGATGTGACACAAGTTGTCAAGAGTGAGGAGTGCCACCAAATCGGTAGTTTTGAGCTTGATTATGGTGGATATAATAATCATAATCAGCAACACTTTTTTCCCCACAGTTATAGCGGGGGTGCTGAGAATGTGGCAAAATACATGCAGAGGAGTTTCAGCAGCAACTCCTTTCATTGCAAGCCTGGGAATTTTCTCTTCCAAAATAATCACTCTGGCACACTCAACAATAATAATAACATGGAGTCTCCAAATTTTCAAAAGCATGATGCGAGTTCACCTGAAAACAGTGGCTTCAATGGAAAAATGAGAAGGGTGTGCAGCACTGGAGATTTGCAGAAGTGTCAAGCGGAATTAGAGGAACCAAATTTCAAAGTAGGGCGTTACAGTGCTGAAGAGAGAAAAGAAAGAATTTCAAAATACAGAGCCAAGAGAAGCCAGAGGAACTTCAACAAAACCATCAAGTATGCATGCCGAAAAACACTAGCCGACAATCGACCACGCATACGTGGCAGATTCGCACGCAACGATGAGGCCAGCGACATTATTCCTATTCCAAATCCTAAGCAGGTTCGAGATGATGAAGATGAAGAAGTCGATTTCTGGATTGAAGGGTTGCAGTTGCACGAAGAGCAGGAGGATGTAGCAGTCAGCAACGTTTATAATAATTATGCATCTAATCAGTTTCAATACTGTCGTTTCTAA 936 0.4274 MATADGELAFFSDPFPFDEATTLCSSTSVDPFSSCFFSFSPPSTHLENLTLQANSSNNNRLIAPTLETDFASFSSSGFDVTQVVKSEECHQIGSFELDYGGYNNHNQQHFFPHSYSGGAENVAKYMQRSFSSNSFHCKPGNFLFQNNHSGTLNNNNNMESPNFQKHDASSPENSGFNGKMRRVCSTGDLQKCQAELEEPNFKVGRYSAEERKERISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDEASDIIPIPNPKQVRDDEDEEVDFWIEGLQLHEEQEDVAVSNVYNNYASNQFQYCRF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211450g00029 311 Pfam CCT motif 211 253 IPR010402 GO:0005515
Stsc211450g00029 311 ProSiteProfiles CCT domain profile. 211 253 IPR010402 GO:0005515
Stsc211450g00029 311 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 31 278 IPR045281 GO:0009909
Stsc211450g00029 311 MobiDBLite consensus disorder prediction 156 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211450g00029 Stsc-Chr211450 168680 170352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211450g00029 207 260 C2C2-CO-like Transcription Factor Family AT5G24930 47.368 7.95e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc211450g00029 CCT 7.9e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211450g00029 - - adu:107479916 462.225