Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211450g00028 ATGGCCACTGCTGATGGAGAGCTTGCTTTTTTCAGTGACCCTTTTCCTTTCGACGAGGCCACTACTCTTTGTTCTTCTACTTCTGTTGACCCTTTTTCATCTTGCTTCTTTTCTTTCTCTCCTCCAAGTACGCACTTAGAAAACCTCACCCTTCAGGCCAATAGCAGCAACAACAACCGTCTTATTGCTCCCACTTTGGAGACTGATTTTGCAAGCTTCTCATCATCGGGTTTTGATGTGACACAAGTTGTCAAGAGTGAGGAGTGCCACCAAATCGGTAGTTTTGAGCTTGATTATGGTGGATATAATAATCATAATCAGCAACACTTTTTTCCCCACAGTTATAGCGGGGGTGCTGAGAATGTGGCAAAATACATGCAGAGGAGTTTCAGCAGCAACTCCTTTCATTGCAAGCCTGGGAATTTTCTCTTCCAAAATAATCACTCTGGCACACTCAACAATAATAATAACATGGAGTCTCCAAATTTTCAAAAGCATGATGCGAGTTCACCTGAAAACAGTGGCTTCAATGGAAAAATGAGAAGGGTGTGCAGCACTGGAGATTTGCAGTGTCAAGCGGAATTAGAGGAACCAAATTTCAAAGTAGGGCGTTACAGTGCTGAAGAGAGAAAAGAAAGAATTTCAAAATACAGAGCCAAGAGAAGCCAGAGGAACTTCAACAAAACCATCAAGTATGCATGCCGAAAAACACTAGCCGACAATCGACCACGCATACGTGGCAGATTCGCACGCAACGATGAGGCCAGCGACATTATTCCTATTCCAAATCCTAAGCAGGTTCGAGATGATGAAGATGAAGAAGTCGATTTCTGGGTAAACTATTTATATATATATATATTATTGCTCTGTCTCAGATTCCAAGGTGAATGCATAAATGAATTATTTTATTTGAACTCATCATATTTTGTTATACTATGTGTAGATTGA 948 0.4093 MATADGELAFFSDPFPFDEATTLCSSTSVDPFSSCFFSFSPPSTHLENLTLQANSSNNNRLIAPTLETDFASFSSSGFDVTQVVKSEECHQIGSFELDYGGYNNHNQQHFFPHSYSGGAENVAKYMQRSFSSNSFHCKPGNFLFQNNHSGTLNNNNNMESPNFQKHDASSPENSGFNGKMRRVCSTGDLQCQAELEEPNFKVGRYSAEERKERISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDEASDIIPIPNPKQVRDDEDEEVDFWVNYLYIYILLLCLRFQGECINELFYLNSSYFVILCVD 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211450g00028 315 MobiDBLite consensus disorder prediction 155 177 - -
Stsc211450g00028 315 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 31 276 IPR045281 GO:0009909
Stsc211450g00028 315 ProSiteProfiles CCT domain profile. 210 252 IPR010402 GO:0005515
Stsc211450g00028 315 Pfam CCT motif 210 252 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211450g00028 Stsc-Chr211450 168680 170352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211450g00028 206 259 C2C2-CO-like Transcription Factor Family AT5G24930 47.368 6.10e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc211450g00028 CCT 8e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211450g00028 - - adu:107479916 413.305