Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211450g00004 ATGGCGAGAAGACAATCTCCTCTGGTTAGCCAAACAGTGGAGACTGGTTGTTCGTCGCGAATGTTCGGAATTTTCAGTTTTCTTGGAGGTCATTTCAGCAGAAGAGTGGTTTTCAATGGGAGCCATTTGAGTAGAGATGTCACTGATCCAGGAAACACAAGCTCCAGAAGCAGCTCAAGTGAGCTTAGTACAGTTGATGAAAAGCTCCCTCAGGCTCACTCTGGTGTAAATTCTAGAAGAAGAAGAGAATATGGTTGCAAAAGTGTCAGTTGTGTGGAGAATGCTCAGGTTGCTGCAGATCAAGGAAATAAAGTGACAAAGATGACTATTGATCCAAAATTTGTCAATAAAAGCTATCTAAGCAAAGAAGGTGCAGAATCTCAACCTGATCAGCTCTTGGATGCTTTACAGATATTATACTCAAACAAAGAGCTTTTCCTGAAACTTCTACAAGATCCAAACTCTCTGCTGGTGAAACAGATCAGTGGCTTACAGAGTTCTCAAGTGAATAATAAATATCAAAACAATATTGCAAGAAAATCTGGAAATCCAGTTAAGTCTTCCTTTGATAAACATGATTCCAGTTCAAGTATTGAGCCAGAACTTCCAGAGAAAATAGTGGTTCTGAAACCTAGCACAGATAATGAGAAAGTTTCTGCTGCCACTAGATTTGATAGTCCATGGCTGAATACTCGTCGAAGCTTGATCCATAATCCACCAAATGCAAAGTTTTCACATTTTCCACTTGGTCATATAAAGAGGAAGTTGAGATATGTCACGAGAGCAAGGCGAAAAGAACAAAAGAAGACTGATGGAGTGCCTGATAAAGATCCCTGTGGTTGCAAGGCCTTTCAAGATGGCCAAAACATAAAAGAATTGAGAAGTGAGGGAAGAAATTCACTTGAGACTTCCTCTTCAATTATTGAGAAAAGGTTCAAGGATTCTGAATTATGCATGGGAAAGGAGGTTGCTTCGGTTAGCGAAAGTTGCAATAGGATGACAGATAATGCTTCAGTCAGCCCTTGTGAGCAAAATACACTGAACATACCTGTTAAAGATAGGAGAAGTCTATCTGTAAGGAGAAAGGAGCATCTTCCTAACTTTGAGTCCATATCAAGCTTGCAAAGGTGCTACAATCATGGTTATATCAATGAAGGGATGAGATACTTGGACAACTATCAAATAGACCATAGAACCAAGATGGGGCTTGAGGAAGAAAGGGAAAGTATTTGTTCCTACAGATCTTTGGGACAGAAAAATGCACCAAGAGAAACCATTAAGACATTTAGTGAGAAGTTGAAGCCTATAGGTACTGATATTAGAACCGAAGAGAGTCTTCCTAGAGATGATGGATATAATGACAGTCCAACTCAGAACTTCGACAAAAGCAATTCAACTAGAGGAATTAAACATTTTCAAGATTCACATCCAGATATCCAAATTCTGTCCTCTCCACCCAAAATTGCTTCGTCAAGCCCTTTTTCCCCTGAAAGAACAGAAGACAGCATCAACCTGAGTGACAAATTTGAGCACCCCAGCATTGAATCTGTTGTTGAGCTTTCCACATTACAACCAGATGAATACCAGGTACAAGAAGTACACAAGCAAATCGAAGATAACCATTTTGCAGAACTTGTAAGATCCTCCTTAAATAGAATAAACAATCTAGCCTCCTCCAAAGACATGTTGGACTGCTCAAGGGAAATTGTGAAGGTTTTCAGCTTGAAATGGGATGAACTCATGGTGAAGTGTGAATCAGCCGATATGCATGATCCATCCGCATTTGATGAACTAAAAGGATCGATGGGCCATCTTTCTTGCAACGCAATCTTACTTGACTGTGTCATGCAAGCATTCATGGAGGTATACCAGAAAAGTGGTTTCCCATTGAACATTGTAAGAAAAAGTCCACACTTGCAAGCATATGTTGCAAAGAAAGTTCTGGCTCAAGAAATTGCTGAAGTGATTAAACTGCATTTTGTGCCTCATCCATCACAAATAACATTAGACGAGCTGGTTGGAAAGGACTTGGAAAGAAGTGAATCTTGGCTAAATATCCAAGTTGATATAGAAGATATTGTGAAAGATGTGGAGGAAGATGTGCTTGAAGATTTGGTATTGGAAATGGTAGCTGAGATGGATATCAGAGACTTGAAAACTTTGCAATGA 2169 0.3965 MARRQSPLVSQTVETGCSSRMFGIFSFLGGHFSRRVVFNGSHLSRDVTDPGNTSSRSSSSELSTVDEKLPQAHSGVNSRRRREYGCKSVSCVENAQVAADQGNKVTKMTIDPKFVNKSYLSKEGAESQPDQLLDALQILYSNKELFLKLLQDPNSLLVKQISGLQSSQVNNKYQNNIARKSGNPVKSSFDKHDSSSSIEPELPEKIVVLKPSTDNEKVSAATRFDSPWLNTRRSLIHNPPNAKFSHFPLGHIKRKLRYVTRARRKEQKKTDGVPDKDPCGCKAFQDGQNIKELRSEGRNSLETSSSIIEKRFKDSELCMGKEVASVSESCNRMTDNASVSPCEQNTLNIPVKDRRSLSVRRKEHLPNFESISSLQRCYNHGYINEGMRYLDNYQIDHRTKMGLEEERESICSYRSLGQKNAPRETIKTFSEKLKPIGTDIRTEESLPRDDGYNDSPTQNFDKSNSTRGIKHFQDSHPDIQILSSPPKIASSSPFSPERTEDSINLSDKFEHPSIESVVELSTLQPDEYQVQEVHKQIEDNHFAELVRSSLNRINNLASSKDMLDCSREIVKVFSLKWDELMVKCESADMHDPSAFDELKGSMGHLSCNAILLDCVMQAFMEVYQKSGFPLNIVRKSPHLQAYVAKKVLAQEIAEVIKLHFVPHPSQITLDELVGKDLERSESWLNIQVDIEDIVKDVEEDVLEDLVLEMVAEMDIRDLKTLQ 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211450g00004 722 MobiDBLite consensus disorder prediction 45 71 - -
Stsc211450g00004 722 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 99 713 - -
Stsc211450g00004 722 MobiDBLite consensus disorder prediction 178 197 - -
Stsc211450g00004 722 MobiDBLite consensus disorder prediction 43 80 - -
Stsc211450g00004 722 Pfam Domain of unknown function (DUF4378) 577 708 IPR025486 -
Stsc211450g00004 722 MobiDBLite consensus disorder prediction 441 464 - -
Stsc211450g00004 722 MobiDBLite consensus disorder prediction 477 500 - -
Stsc211450g00004 722 Pfam Protein of unknown function (DUF3741) 111 155 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211450g00004 Stsc-Chr211450 23215 26088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211450g00004 569 718 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 28.289 6.16e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211450g00004 - - adu:107479933 1080.09