Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc210g00004 ATGTTCAACTCCCTCAATGCCCTTTCTGAGGATGGAAGCCTTTTGACGATGCCTCCTTGGGTCAACCCTTGGCTCCTTTTGGCAATGTCAGTGTCATTTGGTCTCCACTTCTTGATCTTGTATGTGCCTGTCTTGGCACACGTGTTTAGCATCGTTCCGTTGAGCTTCAACGAGTGGCTTTTAGTTTTGGTAGTTGCATTCCCTGTGATTATGATCGATGAAATTCTCAAGTATGTGGGAAGGCGTACAAGTGAATCTCAAACATCAAAAGCAACAACATCAAAGCCAAAATCAGAGTAG 300 0.4433 MFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPVLAHVFSIVPLSFNEWLLVLVVAFPVIMIDEILKYVGRRTSESQTSKATTSKPKSE 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc210g00004 99 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 83 IPR023298 -
Stsc210g00004 99 Gene3D - 1 93 - -
Stsc210g00004 99 PANTHER CALCIUM-TRANSPORTING ATPASE 1 90 - -
Stsc210g00004 99 Pfam Cation transporting ATPase, C-terminus 1 79 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc210g00004 Stsc-Chr210 21558 21857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc210g00004 1 99 Primary Pumps ATPases(2) AT1G07670 74.747 2.47e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc210g00004 K01537 - cit:102611583 172.17