Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc210g00003 ATGATCTCTTCCAACATTGGCGAAGTTGCCTCTATATTCCTAACAGCTGCCTTAGGCATTCCTGAAGGACTAGTACCTGTTCAGCTTCTGTGGGTCAATCTTGTCACAGATGGACCTCCTGCAACAGCCTTGGGATTTAACCCTCCAGACAAAGATGCAATGAAGAAGCCTCCTCGTCGCACTACAGTTGGTATCTTCATCATATGGTATACACATGGTTCCTTCTTGGGCATTGACCTTAGCACTGATGGACATACTCTTGTCACTTATAACCAACTTGCGAATTGGGGTCAATGTTCGACGTGGCAGAATTTCACTGCTTCTCCGTTCATAGCCGGCTCCCGAGTCATCACTTTTAATGACCCCTGCGACTATTTCCAGGATGGAAAAGTGAAAGCCATGACCCTCTCCCTCTGA 417 0.47 MISSNIGEVASIFLTAALGIPEGLVPVQLLWVNLVTDGPPATALGFNPPDKDAMKKPPRRTTVGIFIIWYTHGSFLGIDLSTDGHTLVTYNQLANWGQCSTWQNFTASPFIAGSRVITFNDPCDYFQDGKVKAMTLSL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc210g00003 138 PANTHER CALCIUM-TRANSPORTING ATPASE 1 69 - -
Stsc210g00003 138 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 105 IPR023298 -
Stsc210g00003 138 Pfam Cation transporting ATPase, C-terminus 22 66 IPR006068 -
Stsc210g00003 138 Gene3D - 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc210g00003 Stsc-Chr210 20661 21539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc210g00003 1 138 Primary Pumps ATPases(2) AT1G07810 68.519 5.73e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc210g00003 K01537 - fve:101314868 248.054