Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc209g00001 ATGGCAACATCACTATCCCTTCAATTACTACTCCTCACTCTCCTCCTCCTGCACACGTCAGCAAACACACCCCAATCAACAAAACCGATCACCAACAACCCCCTAACGGACTACATAAAGTCTTCCTGCAAGGCCACGCGCTATCCCGCCGCGTGCCTCCAATCGCTATTGGGCCACGCAACCGCTATTCGCCGGAACGAACTACGCTTGGTCCAAACCGCCTTAACCGTTAGCATTACCAGAACCCAGTCTTGTGCCTTCTTTGTCAAAACCGCCACGCGTCAGAAGGGGGTTCAGGCCCGGGAGGCCCAGGCCGTTAAGGACTGCTTGGACAACATGGACAGCAGCATCGACAGCCTGACCCAGTCCGCAAAAGAGCTGAACGGGCTCACGGGCCGGGCCTCGGCCCAGGACTTTGCGTGGCACATGAGTAACGTGCAGACATGGGTTAGTGCGGCTATGACGTATCAGAGCACGTGCCTTGATGGGTTTTCTGGGCCTTATTACCGTACTATGAATGGAAGATTCAAATCTGCCATAACTGCAAAGGTTGTTAATGCTTCTCAGGTTACGAGCAATGCTCTGGCTTTCGTTAATCGCTTTGCATCCAAGCACCTTACTCAAACTCCATAG 633 0.5324 MATSLSLQLLLLTLLLLHTSANTPQSTKPITNNPLTDYIKSSCKATRYPAACLQSLLGHATAIRRNELRLVQTALTVSITRTQSCAFFVKTATRQKGVQAREAQAVKDCLDNMDSSIDSLTQSAKELNGLTGRASAQDFAWHMSNVQTWVSAAMTYQSTCLDGFSGPYYRTMNGRFKSAITAKVVNASQVTSNALAFVNRFASKHLTQTP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc209g00001 210 NCBIfam pectinesterase inhibitor domain 5 199 IPR006501 GO:0004857
Stsc209g00001 210 CDD PMEI-like_3 41 203 - -
Stsc209g00001 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 197 - -
Stsc209g00001 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 201 IPR035513 -
Stsc209g00001 210 FunFam Pectinesterase inhibitor 3 35 202 - -
Stsc209g00001 210 Pfam Plant invertase/pectin methylesterase inhibitor 38 196 IPR006501 GO:0004857
Stsc209g00001 210 SMART PMEI_2 34 197 IPR006501 GO:0004857
Stsc209g00001 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 201 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc209g00001 Stsc-Chr209 6899 7890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc209g00001 39 198 Carbohydrate Esterase AT3G14310 27.329 1.06e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc209g00001 - - jre:108984668 210.305