Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2094g00002 ATGTTGGAGAATCATTTGGAAGCCAAGTACAAAATTTACACTGGAACTTCCTTGGATTATGTGGCCCTGATGAATAACACTACGTATATAAGACAAGAGACGCTGAAACATTTCCCCTCTGCTCGATTTATGGACTTCGGCAGAGTCAAACAGTATAGTTTCGCTGGAATTTCGGGCGATGATTGGATACAAAAGCACACAGAAAAGTTCCAGCAAAACCTTGAAGAGTATCAAAGAAGCTCATGGAATGAAATGCTAGGCTTGTTGAAGCTAGACAACAACAACAGCAACGAATCAATGGCAAATGATGTGGCATTTGAGTCCATGAAAGAAAAGCTAAAGTTGTTCAACGTTCAATTTGAGGAGATGTGCTGCACTCAGTCTAAATGGTTTGCATGCAATGAAACACGGAGAAAGATAATAGTGTCCATAGAAAACATGCTATTGCCGGCATATGGAAGCTTCGTTGGAAGGCTTCAGGATGTTCTTGGTAAGGCTGCTTATGACTATATACAGTATGGAATGCTTGACATTATAGCTCGGCTCAACCGTTTGTTTCTCGGAAGCAAACGGATGCACCGGTAG 585 0.4154 MLENHLEAKYKIYTGTSLDYVALMNNTTYIRQETLKHFPSARFMDFGRVKQYSFAGISGDDWIQKHTEKFQQNLEEYQRSSWNEMLGLLKLDNNNSNESMANDVAFESMKEKLKLFNVQFEEMCCTQSKWFACNETRRKIIVSIENMLLPAYGSFVGRLQDVLGKAAYDYIQYGMLDIIARLNRLFLGSKRMHR 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2094g00002 194 Gene3D Exocyst complex component Exo70 1 194 - -
Stsc2094g00002 194 SUPERFAMILY Cullin repeat-like 2 186 IPR016159 -
Stsc2094g00002 194 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 187 IPR004140 GO:0000145|GO:0006887
Stsc2094g00002 194 Pfam Exo70 exocyst complex subunit 2 183 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2094g00002 Stsc-Chr2094 1307 1891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2094g00002 1 189 EXO70 exocyst subunit family AT5G58430 44.271 1.22e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2094g00002 K07195 - aip:107607041 258.84