Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2094g00001 GTATCTCATGGGGCAAGTAATCTCCAACTAAAAGCTCATCTGGCATATTTGGTTCTGATGATTACATCTTTCTACTCCTTTTACTTTGATAAAGCTGTGAATGGGAAACCAGATGCATACTCTATAGTTTCTTGTGCTGCTTTTGCTGTCATTTTTCTTGGCTTGTCAAGGCATAGTCACTGCGGATTTGAAGTGGACTTGCTCTATTTCTTTCTCGCAGCTCTAACAATACAACTCATGAGGATAAAGTGGTTTCTTGCTATACTTGGAGCATCTTATAGCTATGCTCTCATCATGATCCGTACCCGTTTGGATGCTCAACTAGAAGTGAATGGATATCATGGAGTCCCAGAAGAGCCTCATGTCATTCAAGTAGATCCACCAGAATTGCCATTAAATGACAATGCAATCACTGAAGTCAATTCGCATTTGCAAGAAGACAATAACAATTTTGCTCTCATCAAGCCACGCCTCTTGTCTTCTCTAAAGGCGCTTAAGAAGCAGAATCGAAAACTTTTAGGCCTACTTTACAGCCAGACACTGGTGGAGCCTTTTCATCTTGATGAAAATTTGTTAATCGACACGCTTCCACGCGAAATTATCAATAACATCAATGAAACTTTTAAGATGGCACTGGCTGCTGGATTTGAGAAGGAGTGTTGCCACTTATACAGCAGTTGCCGTAGGGAGTTCTTGCAGCAGTTTCTTTCAGAATTAGAGTTGAAAGAAGCACAAAATAAGGACCAAATTGTTTTCATGTCACAAGTTTTAAGCTATCTCCGTGTACTATTTCTGAATGAACGCAGGCTTTGTGATCGAATCTTCTTTGGATTCTCCTCAGTGGGGGATCTGTCTTTTGTGCTGATTTGCAAGGAACTCACCATTCATCTACTAAACTTGCTTAATACAATAGTTGTTGACATCAGTTCGTCGACACCAGCCATGTTTAGAAGAGTGGTGAATATGTTTGTTGAATTAAGTGATATGATTACCGAGTTAGAATTGTTATTTCCTGATCCGACCGGTGCATCACTAAGAAACGAAGCAATCAAGGCAAGATAA 1062 0.4002 VSHGASNLQLKAHLAYLVLMITSFYSFYFDKAVNGKPDAYSIVSCAAFAVIFLGLSRHSHCGFEVDLLYFFLAALTIQLMRIKWFLAILGASYSYALIMIRTRLDAQLEVNGYHGVPEEPHVIQVDPPELPLNDNAITEVNSHLQEDNNNFALIKPRLLSSLKALKKQNRKLLGLLYSQTLVEPFHLDENLLIDTLPREIINNINETFKMALAAGFEKECCHLYSSCRREFLQQFLSELELKEAQNKDQIVFMSQVLSYLRVLFLNERRLCDRIFFGFSSVGDLSFVLICKELTIHLLNLLNTIVVDISSSTPAMFRRVVNMFVELSDMITELELLFPDPTGASLRNEAIKAR 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2094g00001 353 PANTHER EXOCYST COMPLEX PROTEIN EXO70 188 349 IPR004140 GO:0000145|GO:0006887
Stsc2094g00001 353 Gene3D Exocyst complex component Exo70 133 353 - -
Stsc2094g00001 353 SUPERFAMILY Cullin repeat-like 146 349 IPR016159 -
Stsc2094g00001 353 Pfam Exo70 exocyst complex subunit 257 350 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2094g00001 Stsc-Chr2094 193 1254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2094g00001 188 350 EXO70 exocyst subunit family AT5G58430 42.286 2.32e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2094g00001 - - aip:107607041 321.242