Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc207g00002 ATGTCAACTGCGCCCGCCCCTTCTTCGCCGCCGGCGGGTAACTCTACCGCCCCGCCGCCATCCACTCCTGCCACGCCTTCTGCTCCGGCACCAACCACTCCTTCAAATCCGCCACCGGCTACTCCCTCCTCGCCGCCACCTGCCACTCCCTCCTCCCCGCCGCCGGCAACTCCATCTTCGCCACCTCCGGCAACACCCTCAGCTCCACCTCCGGCCACTCCATCTACCTCCCCGCCTCCAGCAACTCCTTCAACGCCGTCTACCTCGCCTCCGAAAGCATCTCCCGCCACTCCATCGACCTCTCCGCCGTCGCCGCCGTCTCCGTCTTCCGGCGGAAGCACCACTCCCAGTCCACCTTCTCGTGGCTCTCCTTCTCCCCCATCTTCCGGCGGCAAAACGCCATCTTCGTCCAAGTCTCCGCCGTCGTCGTCGTCCCCATCGCCACCTCCATCATCTTCATCGGGCATTTCCACAGGAGTTGTGGTCGGAATCGCCGTTGGTGCTGTAGCAGTTCTTGTGGTCCTTAGCGTTCTCTGCATATGCTGCAGGAAGAAAAAGAGAAGACGCGACGAGGAGCGCTACTACGGTTACCCACCGCCTCAGCAGCCGCCACGTGGACCCAAAGATGACTATGGTGGTCCCCAACACCAGTGGCAGCACAATGCTCCGCCTCCTTCAGATCACGTGGTCTCCGTCCAGCCACCGAAGCCATCGCCTCCGCCTCCTGCTGTCACGCGGCCTCCGCCGGTGTACCAACCTCCACCACCACCTCCACCTTTCATGAGCAGCAGTGGCGGCTCTGGATCAAACTATTCAGGTGGTGAGCCACTTCCACCTCCTTCTCCAGGCATTGCATTAGGCTTCTCAAAGAGCACTTTCACATACGAGGAGCTGGCGCGAGCAACCGATGGATTCTCCGACGCCAACCTCCTCGGATCGGGTGGGTTCGGGTATGTGCATAGAGGAATCCTCCCCAACGGTAAGGAAGTGGCGGTGAAGCAGCTGAAGGCCGGTAGCGGACAAGGAGAGCGTGAATTCCAAGCTGAAGTAGAGATAATTAGTCGTGTTCATCACAAGCACCTTGTTTCTTTGGTTGGGTACTGCATCACCGGGACCCAGAGGCTGCTTGTTTATGAATTTGTCCCCAACAACACGTTGGAATTCCATTTACATGGGAGAGGCCGACCTACAATGGATTGGCCCACAAGACTTCGAATTGCTTTAGGATCTGCTAAAGGGCTGTCGTATCTCCATGAAGATTGTCATCCTAAGATCATTCATCGTGATATCAAATCTGCTAACATTCTTCTCGATTTTAAGTTTGAAGCTAAGGTTGCTGATTTCGGGCTTGCAAAGTTCTCTTCTGATGTCAACACTCATGTTTCCACCCGAGTGATGGGGACTTTCGGGTATCTGGCTCCGGAATATGCTTCCAGTGGAAAACTCACAGACAAATCAGATGTTTTCTCCTATGGAGTCATGCTTCTCGAGTTAATTACTGGAAGAAGGCCTGTTGATAAAAACCAAACTTTCATGGAGGATAGTTTGGTAGACTGGGCTAGGCCTTTGCTCAACCGTGCCTTGGATGAAGATGATTATGACTCTCTAGTTGACCCAAGGCTCCAGAATGAATATGATCCCAATGAGATGGCTCGCATGGTGGCATCTGCCGCTGCTTGCACGCGTCATTCAGCGAAGCGTCGACCAAGGATGAGCCAGGTAAAGTGA 1728 0.5532 MSTAPAPSSPPAGNSTAPPPSTPATPSAPAPTTPSNPPPATPSSPPPATPSSPPPATPSSPPPATPSAPPPATPSTSPPPATPSTPSTSPPKASPATPSTSPPSPPSPSSGGSTTPSPPSRGSPSPPSSGGKTPSSSKSPPSSSSPSPPPSSSSGISTGVVVGIAVGAVAVLVVLSVLCICCRKKKRRRDEERYYGYPPPQQPPRGPKDDYGGPQHQWQHNAPPPSDHVVSVQPPKPSPPPPAVTRPPPVYQPPPPPPPFMSSSGGSGSNYSGGEPLPPPSPGIALGFSKSTFTYEELARATDGFSDANLLGSGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGRGRPTMDWPTRLRIALGSAKGLSYLHEDCHPKIIHRDIKSANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGVMLLELITGRRPVDKNQTFMEDSLVDWARPLLNRALDEDDYDSLVDPRLQNEYDPNEMARMVASAAACTRHSAKRRPRMSQVK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc207g00002 575 MobiDBLite consensus disorder prediction 126 140 - -
Stsc207g00002 575 FunFam Proline-rich receptor-like protein kinase PERK1 381 575 - -
Stsc207g00002 575 Gene3D Phosphorylase Kinase; domain 1 285 380 - -
Stsc207g00002 575 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Stsc207g00002 575 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 167 574 IPR047117 -
Stsc207g00002 575 FunFam proline-rich receptor-like protein kinase PERK1 283 380 - -
Stsc207g00002 575 Pfam Protein tyrosine and serine/threonine kinase 310 574 IPR001245 GO:0004672|GO:0006468
Stsc207g00002 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Stsc207g00002 575 SUPERFAMILY Protein kinase-like (PK-like) 282 574 IPR011009 -
Stsc207g00002 575 MobiDBLite consensus disorder prediction 189 285 - -
Stsc207g00002 575 Gene3D Transferase(Phosphotransferase) domain 1 381 575 - -
Stsc207g00002 575 SMART serkin_6 305 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc207g00002 575 MobiDBLite consensus disorder prediction 1 157 - -
Stsc207g00002 575 ProSiteProfiles Protein kinase domain profile. 305 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc207g00002 575 CDD STKc_IRAK 311 574 - -
Stsc207g00002 575 MobiDBLite consensus disorder prediction 228 262 - -
Stsc207g00002 575 MobiDBLite consensus disorder prediction 11 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc207g00002 Stsc-Chr207 10392 14092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc207g00002 124 574 Trihelix Transcription Factor Family AT1G70460 53.982 5.48e-164 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Stsc207g00002 PK_Tyr_Ser-Thr 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc207g00002 - - gmx:100781944 657.907