Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc206g00004 ATGGAACGCGTTATTGGAAGAGCCGATGCAACAGAAGAGATTGTACAGTTCGTCACCAATAATGATAAGAATAATGTGTTGTTAATGTTGACGTTGTTGAGTAAGGAAACCTGGGAATATTTCTATTTTTTATTCGAGAATTCATTAAATCCAGGTCAGCTTGACGAGGAATATGTCCCCAAGGTTGGAATGAGTTTTGAAACAGTAGTTGAAGCTGGTTTGTTCTATAAAGAGTATGCGAAACGTGCAGGTTTCTCTACAAAGATAAGGAACTCAAATAGGTGTAAAGTGACCAAGGAAGTAAAGAATCAACTCATCACTTGCAATAGAGAAGAGAGATGGAGATCTGAAGTACCTTTTGTAGAGAAGACAAACCCGATATGTGGTGCAAATTGTCCTGCACGAATTTATGTGCATGTAGACAAGAAGACTCGACTTTGTGTATTTCCAAGGTTGTTCTCCATCATTCACATCCATGCTGTGCTGATCAAGCTCAGATGTTACCACAACATAGGGGGCCGAGCTTGGACATGCGTAGGACGATAG 546 0.4029 MERVIGRADATEEIVQFVTNNDKNNVLLMLTLLSKETWEYFYFLFENSLNPGQLDEEYVPKVGMSFETVVEAGLFYKEYAKRAGFSTKIRNSNRCKVTKEVKNQLITCNREERWRSEVPFVEKTNPICGANCPARIYVHVDKKTRLCVFPRLFSIIHIHAVLIKLRCYHNIGGRAWTCVGR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc206g00004 181 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 50 143 - -
Stsc206g00004 181 Pfam FAR1 DNA-binding domain 75 149 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc206g00004 Stsc-Chr206 27380 28174 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc206g00004 FAR1 1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc206g00004 - - aip:110262592 114.39