Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc205g00003 | ATGGCGGATAATTTTCCTGTTGGATACAGGTTCCTTCCAAAAGAAGAGGAGCTTCTTACTTACTACCTCAAAAACAAGATTGAGGGAAATGATTCACTCATCAACAACACCATTTCTCAGATTCATCTCTATAGCTTTGATCCTTGGGACTTGCCAGAACATTCGAAAGTTAAATCGGATGATTCAGAATGGTTTTTCTTCACTGAGTTGAACTACACAACGGAGAAGAATAACAGGTGTGTAAGAAAAACTAATGGCGGATACTGGAAGATTACAGGGAAAGAGCGTCAGATTAAGACAATGGCGACAGACACTCTCATAGGAACAAAAAAAACACTTGTTTTCTACAACAATCGTCCAGATAGTGTCAAGACAAATTGGGTGATGCACGAATATCATGCACCTAATCATAAGACCATGGTCTTGTGCCGTGTAACAAATAATCCTGAGAAAAAGGAAAAGAAAGCCAAGAGAAAAGCAAACAACCTACTTGAAGAGGAAGTAACACAAACTAAGAAAAAAGCTAGCAACCTAATTGAAGAGGAAGTAACAAGAGGAGAAGATGAACCGGTCAGTGAAATTACTAGCCATCTTACCCAAGAAACAACACCAGAAGATACAAGAATTCAAGATAATGCTGTGGACCAAATTCCCTCATTGGTACCGCAATCTCCGGCGGCCACGGCCACGGCCACATCTCCTGCCTCGTGTTCTGGGAACGAAAACAACAATGCCGGGTCGCTTCCGCTTCAAGCTATCTTGGAGCGAGATGCTTTCTTCAATTCAATGTATTCCAGTGTTGATGTTTGCCCTGGCACCGGGTTCTTGTATTCGGAGTTCTTGAATTCGCTGTTGGCCGGGGATGATCATTGGGCCACCTCTGACTCTCCATAG | 894 | 0.4273 | MADNFPVGYRFLPKEEELLTYYLKNKIEGNDSLINNTISQIHLYSFDPWDLPEHSKVKSDDSEWFFFTELNYTTEKNNRCVRKTNGGYWKITGKERQIKTMATDTLIGTKKTLVFYNNRPDSVKTNWVMHEYHAPNHKTMVLCRVTNNPEKKEKKAKRKANNLLEEEVTQTKKKASNLIEEEVTRGEDEPVSEITSHLTQETTPEDTRIQDNAVDQIPSLVPQSPAATATATSPASCSGNENNNAGSLPLQAILERDAFFNSMYSSVDVCPGTGFLYSEFLNSLLAGDDHWATSDSP | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc205g00003 | 297 | Gene3D | NAC domain | 15 | 154 | IPR036093 | GO:0003677|GO:0006355 | |
Stsc205g00003 | 297 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 82-RELATED | 6 | 170 | - | - | |
Stsc205g00003 | 297 | MobiDBLite | consensus disorder prediction | 149 | 204 | - | - | |
Stsc205g00003 | 297 | Coils | Coil | 154 | 181 | - | - | |
Stsc205g00003 | 297 | MobiDBLite | consensus disorder prediction | 149 | 194 | - | - | |
Stsc205g00003 | 297 | ProSiteProfiles | NAC domain profile. | 5 | 148 | IPR003441 | GO:0003677|GO:0006355 | |
Stsc205g00003 | 297 | SUPERFAMILY | NAC domain | 4 | 147 | IPR036093 | GO:0003677|GO:0006355 | |
Stsc205g00003 | 297 | Pfam | No apical meristem (NAM) protein | 6 | 133 | IPR003441 | GO:0003677|GO:0006355 | |
Stsc205g00003 | 297 | MobiDBLite | consensus disorder prediction | 223 | 243 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc205g00003 | Stsc-Chr205 | 41878 | 46665 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc205g00003 | 3 | 188 | NAC Transcription Factor Family | AT3G49530 | 37.313 | 4.73e-38 | 137 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Stsc205g00003 | NAM | 6e-33 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc205g00003 | - | - | aip:107626709 | 264.618 |