Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc203g00015 ATGTATAAGGGGAGATTTGGAGAGTGCAATGGAAATGGTGATCATCATCTTGGATATGTTGAAACTGATCCTTCTGGAAGATATGGTCGTTTGAAAGATGTGCTAGGCAGAGGAGCAATGAAAACAGTGTATAGAGCATTTGATGAGTTCTTAGGAATAGAAGTGGCATGGAACCAAGTCCACCTTGGTGATGCATTTCATTCAGCAGAACAACTTCAACGTCTTTACTCAGAGGTTCATCTTCTTAAACACCTCACCCACAAATCAATGATGATCTTCTACGGCTCTTGGATTGATCTCAATCGCAAAACCTTCAACTTCATCACAGAATTGTTCACTTCCGGTACCCTTAGAGAGTATAGGCAGAAGTATAGAAGAGTAGAAATGAGAGTGTTGAAGAATTGGGCACGCCAGATTCTTAGTGGTTTGGAGTATTTACACAGTAACAATCCACCTGTGATACATAGAGACCTAAAATGTGACAATATCTTTGTCAATGGCCATTTGGGACAGGTCAAAATTGGTGACTTAGGCCTTGCAGCTATACTTCTTAGCTCCAAACATGCTCACAGTGTTATAGGCACACCAGAGTTCATGGCACCAGAGTTGTATGAAGAAGAGTACAATGAGCTTGTAGACATATACTCATTTGGGATGTGTATGATTGAGATGCTTACTTTTGATTTCCCATATAGTGAGTGCTCCAACCCTGCTCAAATTTACAAGAAAGTTACTTCGGGTAAGCTACCAAATGCATATTACAAAATCAAAGATTTTGAAGCACAAAGATTTGTGGGGAAATGTTTGGCACATGTCTCGAAGAGGCCATCAGCAAAGGAGCTATTGTTGGACCCCTTTTTGGCCATTGATGACCCAATTGAGTCATCATTAGTTCCAATCACAAAATTACTCACAAATAGTCAAGCTTTGAAGCTTAATTATTCAAATGCAGAAGCTGCAAAGAGTGATAGGACAAAGAGCACAGACATGACCATCACTGGCTCAATGAATCAAGTGGACATTAACACAGTTTTTCTTAAAGTCAAGATTTGTGACGCTAACGGGCATACAAGAAACGTGTTCTTTCCATTTGACACAATAAAGGACACAGCTATGGAGGTAGCCATGGAGATGGTAAATGAACTTGAAATCAGCCACTTGGAACCATTGGAGATTGCTGCCATGATAGATCATGAGGTTTCAGCTTTAGTTCCAACTTGGAGAGACCCTAATAGAGGAGGTATTACTACTTGTTATCATCATCAACATCCACAACACCAAAGACAACACAGCTTCAACTATGAAGAAGATGATGAAGATATCAATAACCACCACCCTTTCTTAACATCACCATCATCATCATCATGTCCATCTTCTCCTCATGGATCCATCCACATGTCCTGTTCCTCATACAAGAACCATATTAACAACTGTAATGGGAATAATTGTCCTTTTCTTCCGAACCAATGGCCTCAAGAGGATCCATTATCAATGAATGATGATGCAAGCTCTCTAAGCTCAATGAACTCCATGAAATGTTCCAATGTCCAATACAGTGACAAATCATCATCATCAGGCTCAGGCAATGAAGAAAATGAGAATAATAATAATGTAGCAACAACAACAACAGTGAAGAAGAGCCATCTTGATGAACCCTTACAAGTCTGCAACTCAAGAATGGTGAACCCTTACAATGATAAGAATTGTTGCATGTGTAATAATAATAATGGTCATGGAGCAAGGAGGATTCATCAATCTTGCATGGGAGAGAGGAGAAGCCAAGAGCTTCAAGGTTTGATTATGTTGGAGGAGATGTGCAAGTTAAAGAGACGCATGTTCAACACCGTTGGAACCATGGAGAACATTGGGTTTTGTCATCACCCTCTTAGAGCTCGCAGATGCTTTGGTACTCTTTGA 1917 0.4011 MYKGRFGECNGNGDHHLGYVETDPSGRYGRLKDVLGRGAMKTVYRAFDEFLGIEVAWNQVHLGDAFHSAEQLQRLYSEVHLLKHLTHKSMMIFYGSWIDLNRKTFNFITELFTSGTLREYRQKYRRVEMRVLKNWARQILSGLEYLHSNNPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILLSSKHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTFDFPYSECSNPAQIYKKVTSGKLPNAYYKIKDFEAQRFVGKCLAHVSKRPSAKELLLDPFLAIDDPIESSLVPITKLLTNSQALKLNYSNAEAAKSDRTKSTDMTITGSMNQVDINTVFLKVKICDANGHTRNVFFPFDTIKDTAMEVAMEMVNELEISHLEPLEIAAMIDHEVSALVPTWRDPNRGGITTCYHHQHPQHQRQHSFNYEEDDEDINNHHPFLTSPSSSSCPSSPHGSIHMSCSSYKNHINNCNGNNCPFLPNQWPQEDPLSMNDDASSLSSMNSMKCSNVQYSDKSSSSGSGNEENENNNNVATTTTVKKSHLDEPLQVCNSRMVNPYNDKNCCMCNNNNGHGARRIHQSCMGERRSQELQGLIMLEEMCKLKRRMFNTVGTMENIGFCHHPLRARRCFGTL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc203g00015 638 CDD STKc_WNK 27 287 - -
Stsc203g00015 638 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 18 537 - -
Stsc203g00015 638 FunFam probable serine/threonine-protein kinase WNK9 112 292 - -
Stsc203g00015 638 SUPERFAMILY Protein kinase-like (PK-like) 31 288 IPR011009 -
Stsc203g00015 638 SMART serkin_6 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc203g00015 638 Gene3D Phosphorylase Kinase; domain 1 14 110 - -
Stsc203g00015 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Stsc203g00015 638 Pfam Protein kinase domain 32 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc203g00015 638 Gene3D Transferase(Phosphotransferase) domain 1 112 292 - -
Stsc203g00015 638 MobiDBLite consensus disorder prediction 515 536 - -
Stsc203g00015 638 MobiDBLite consensus disorder prediction 437 459 - -
Stsc203g00015 638 ProSiteProfiles Protein kinase domain profile. 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc203g00015 638 MobiDBLite consensus disorder prediction 445 459 - -
Stsc203g00015 638 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc203g00015 Stsc-Chr203 59892 63551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc203g00015 6 440 MAP Kinase Kinase Kinase AT3G51630 63.326 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc203g00015 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc203g00015 K08867 - gmx:100272206 762.296