Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc203g00013 ATGGTATCAACCATAGCATCTTATGTAGTCACTCCAAAGGAAGAAACTCCAAAGGGTGTTTTCTGCTTATCAGAGAGTGACCAAATCTGGCGTTGGAGTCATTCAACCACAGTCTATGTTTACAATAACAACAATAATGTGAAAGTGAATGTCCTTGTTCAAAGAATGAGAGAATCCCTTAGCCTCATTCTGGTTCACTACTATCCCTTATGTGGACGGTTGAATTGGACAGAAGGTGGCCGCTTGAGAATGGATTGTAACGCAAAGGGAGCCATCCTGCTTCAAGCTGAATCCACCAAATCAATTGATGAATATGGAGACTTCTCACCAAATGATGATGCCATCAAAGAACTCCTACCAAAGCTTGATTACTCTCAAGCCCATAGAGGACATTCCTCTGTTGCTGGCACAACCTTTCACTTCATCAACTCATGGGCCAAACTCACCAGAGGAGAAACATTGGACACAAATGAACTGCCATTTCTCGACCGAACAGTGTTCACGGCCTCTAGCATGTCGTCGTTGCGGCGTTTCGACCACCCGGAGTTTAAGCCTCCACCACTCATCCGGGGAAGAACAGACAACATTGAAGAACAAAAGAAGAAGACAAGGTTTACATTGTTGAACCTCACAGCAAAACAAGTGCAGAAACTAACGCAGAATGCTAATACTAATTATTCTAAATCCCAGCAGAAACCTTACAGCAGATTTGAAGCTATTGCAGCTCATATATGGCGATGTGCTTGCATGGCCCGAGAGCTTGACAATAGTTAA 774 0.4354 MVSTIASYVVTPKEETPKGVFCLSESDQIWRWSHSTTVYVYNNNNNVKVNVLVQRMRESLSLILVHYYPLCGRLNWTEGGRLRMDCNAKGAILLQAESTKSIDEYGDFSPNDDAIKELLPKLDYSQAHRGHSSVAGTTFHFINSWAKLTRGETLDTNELPFLDRTVFTASSMSSLRRFDHPEFKPPPLIRGRTDNIEEQKKKTRFTLLNLTAKQVQKLTQNANTNYSKSQQKPYSRFEAIAAHIWRCACMARELDNS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc203g00013 257 Gene3D - 188 257 IPR023213 -
Stsc203g00013 257 Gene3D - 1 135 IPR023213 -
Stsc203g00013 257 Gene3D - 136 185 IPR023213 -
Stsc203g00013 257 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 253 - -
Stsc203g00013 257 Pfam Transferase family 139 256 - -
Stsc203g00013 257 Pfam Transferase family 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc203g00013 Stsc-Chr203 52277 53129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc203g00013 7 256 Monolignol Biosynthesis Gene Families AT5G48930 28.832 3.95e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc203g00013 K13065 - gmx:100778626 245.358