Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc203g00006 ATGGGGTGTTTTACTGTATTGAAAGGCAAGAAGAAAAAGCATGATCAAATCGCATATGTAAAACGTGTGAGCCACAGCGAGCATGTGCCTACAGCATTGCCGGAACCTCATACGCGAACGCGAACGCTCCAGTCTGCGCCTCCTAGTTTTAGGACAAGAGTTAAACCCATTCAACCAATTGGTAAAATGACTTACAATAGAACAAGAGCATTATCTGCTCCATCGACTCTCGATGCAGCGGAACAAGATGCTTTGGATTCGGTTGAGTATGAGGAACAAGAAGAGTCAAGACACCGAGGAGGATCAATGAAGGAGCAGCATTTGTCTAGTCCACAGCCTTTACCGCTTCCATCTCCTAAGGGTGGCAGTTCATTGAAGGCTATGGGCAGCTTTAAGTCAGTGACAGCTAATGTTCCTCCAAATTCTTCTGGACCTTTGCCGCTTCCACCCACAGGGTCGCTTCGAAACTTTCAGTATGATGAAATTGCTGCTGCTTGCCACAATTTCTCCTCAGATCGATGCATGTCGGAATGTCTTTCGTCCAAAATATATAAAGCTTCCTTTGGCGATGATACTTCTTCAAGCTCAAAGAAGTTTGAAGCCACTGTCACGCGTCTCCACCCATCGAATCAGGGATTGAAGGAATTCATAAGTGAGGTCAATACTATAGCATCTTTGCAGCATCCGAACCTCTGTAAATTGCTAGGGTTTCATGCACGTGAAGGTACGGAACAGAGAATGTTGGTTTATGAGAGGCTATATCATGGAAGCTTGGACCGCCTGTTGTACGGGAGATCTGATGGCCCGTCTCTTGATTGGAACACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCGATGTATAACGAATTTTCAACTGCTAACATACAGATAGACAAAGATTTCAGTGCCAAGCTTTCAGGGTATGGTTGCGTTGGACAACTTCCCGAGGAAGAGATATCGAGCAGTTCATCGGCGGTTGGCAACCTATCAATGGAGACACTGGAAAAAGGAATGCTTACACCAAAGAGCAACGTATGGAGTTTCGGAATTTTCCTTCTAGAGCTCCTCACCGGCAGAAAGAATCTAGATAGCCGTCACCCCAAGGAAGAGAGAAATTTGGTCAAGTGGAGCCGTCCCTTCCTAGCTGACGATTATCGACTTTCGTTGATTATGGATCCTCAACTCAAAGGTCGCTTTCCTTCCAAAGCGGCGAGAACAGTAGCTGACATCGCACAAAGATGCCTTCAGAAGGAGCCGTCCGAAAGGCCAACCATGAGGACTGTTGTCAAGCACCTCAAAATGATACAGGATTTAAAGTACTCTTGCCGGTTCCCGCTTCAAGAACCAGCCACAATCTCCGGAAAACATATGTCGCGATCCCCAAGTCTTAATGGCATCATCAGCCCTGCGCCTAGGCTGAGTTACTCTCCGTCTCCCCCACCAGCAGTGGCCCCACCATCTGTTTCACCACCAAGATGGTCCGGAGTCCCATTCCTTCCTCCGCGGGCATGTTCCTCTACCCTCTCCCTGGAGGAGCTCGATAGGCAGGAGAGCCGCAAGTCGTCGTCCTCGGCCTCTAGGAGGGCTAGTGTTGAAGGGTTTTGA 1644 0.4781 MGCFTVLKGKKKKHDQIAYVKRVSHSEHVPTALPEPHTRTRTLQSAPPSFRTRVKPIQPIGKMTYNRTRALSAPSTLDAAEQDALDSVEYEEQEESRHRGGSMKEQHLSSPQPLPLPSPKGGSSLKAMGSFKSVTANVPPNSSGPLPLPPTGSLRNFQYDEIAAACHNFSSDRCMSECLSSKIYKASFGDDTSSSSKKFEATVTRLHPSNQGLKEFISEVNTIASLQHPNLCKLLGFHAREGTEQRMLVYERLYHGSLDRLLYGRSDGPSLDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGQLPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDYRLSLIMDPQLKGRFPSKAARTVADIAQRCLQKEPSERPTMRTVVKHLKMIQDLKYSCRFPLQEPATISGKHMSRSPSLNGIISPAPRLSYSPSPPPAVAPPSVSPPRWSGVPFLPPRACSSTLSLEELDRQESRKSSSSASRRASVEGF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc203g00006 547 SUPERFAMILY Protein kinase-like (PK-like) 144 457 IPR011009 -
Stsc203g00006 547 MobiDBLite consensus disorder prediction 466 484 - -
Stsc203g00006 547 MobiDBLite consensus disorder prediction 72 127 - -
Stsc203g00006 547 Gene3D Phosphorylase Kinase; domain 1 149 251 - -
Stsc203g00006 547 Gene3D Transferase(Phosphotransferase) domain 1 253 457 - -
Stsc203g00006 547 Pfam Protein tyrosine and serine/threonine kinase 181 445 IPR001245 GO:0004672|GO:0006468
Stsc203g00006 547 PANTHER OS01G0588500 PROTEIN-RELATED 107 449 - -
Stsc203g00006 547 MobiDBLite consensus disorder prediction 465 547 - -
Stsc203g00006 547 MobiDBLite consensus disorder prediction 28 47 - -
Stsc203g00006 547 ProSiteProfiles Protein kinase domain profile. 169 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc203g00006 547 MobiDBLite consensus disorder prediction 486 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc203g00006 Stsc-Chr203 19354 22780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc203g00006 148 449 Receptor kinase-like Gene Family AT4G02010 38.111 2.68e-60 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Stsc203g00006 PK_Tyr_Ser-Thr 8.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc203g00006 - - gmx:100809117 915.605