Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc203g00001 ATGAACATAGATCACACTCACTCTGTGAAGATGAAGATGAAGATGCAATTGTGCTGCATATTCCAGCTACTGTTTCTGATACCAGTGCTATCTGGTGGTGGTGATGACACTTCATTCAATGATGATGTTTTGGGTTTGATTGTGTTCAAAGCTGGTTTGGATGATCCAAAGGGTAAGCTTTCTTCATGGAATGAAGATGATTTCACCCCTTGCAATTGGAATGGTGTGGATTGTGACCATTCAACTAAAAGGGTCAATTCCCTTGTTCTTGATGGTTTCTCTCTTTCTGGCCACATTGATAGAGGACTATTGAGGCTTCAGAATCTCAGGATTCTGTCACTTGCAAGGAACAACTTCACTGGCACCATAAACCCTGATCTTGCTTCATCACTTGCTGGATTGCAAGTTGTTGACTTCAGTGACAACAATCTCTCTGGTTCAATCCCTGAAGGGTTCTTCAACCAATGTGCCTCTCTTAGAACGGTTTCATTTGCCAAGAACAACCTCACAGGTAAGGTTCCTGATTCCTTGAGCTCATGCTCCACATTGGTAAATGTTAACTTTTCCTACAATCAAATTTCTGGTATATTGCCATCTGGGGTGTGGTTCTTGAGGGCAATACAGTCATTTGATCTGTCAAATAACTTGCTTGAAGGAGAGATTCCTGAGGGGATTCATAATCTGTATGATTTGAGGGAGTTGAATTTGCAGAATAATCACTTTAGTGGAAAGATTCCTGAAGAAATTGGTGGCTGCTTGGTTTTGAAATCACTGGATTTGAGTGGCAATTTTCTATCTGGTGAACTTCCTGAGTCAATGCAAAGGCTCTCTTCATGCACATCACTCAGTTTGCAGAGAAATTCCCTCGCCGGAACCGTTCCTGATTGGATTGGAGGGTTGAGAAGTCTAGAGATTTTGGATCTTTCAGCTAATGGATTTTCCGGTTGGATTCCGAAATCATTAGGGAATTTAGACTCACTGGTGAGGCTGAATTTATCCAGGAATCGGTTCACAAGAAACGTGCCGGATTTGATGGCGAATTGCACTAAGCTAACATCATTTGACATAAGCCACAATGAATTTTCAGGCCAATTTCCTTGGTGGATGTTCATAATGGGTTTACAAGGTTCACCTTTTCATGGTCTTCAAGTGTTGGATCTGTCATCCAATGCATTTTCGGGTGAGCTTCCTTATGGCATTGGGAACCTTAGCAGTTTGCAAGTGTTGAATGTTTCGGCCAACGATATCTCCGGTTCGATTCCTGTGACCATAGGAGAACTCAAATCTTTGTACATTCTTGACATGAGTTACAACAATCTCAATGGAAGCATTGCTTCTGAAATTCAAGGTGCAAGCTCACTCACTGAATTGAGGCTACAAAGCAACTTTCTAAGTGGGGGAATTCCAACCGAAATCGATAAGTGTTCAGCTATAACATCTTTGATACTTTCTCACAACAAGCTTACAGGTTCAATCCCAGCATCCATTGCAAACTTAAACAATCTTCAGTATGTTGATTTGTCATGGAATGAACTCTCTGGAGGCTTACCGAAAGAGCTTACAAATCTTTTGCACCTTCTCGATTTTAATGTATCCTACAACCACCTTCAAGGTGAGCTACCAGTGGGTGGATTCTTCAACACTATCTCGCCGTCCTCTGTCTCCGGTAACTCCTTGTTATGTGGTTCAGTTGTCAATCAATCCTGTCCATCTGATCACCCGAAGCCTATTGTCTTAAACCCGAATTCTTCCAGTTCAAACTCAAGCATTTCGGCCCAGAATCGCCATCATAAGATCATACTCAGCATCTCAGCTCTTATAGCTATAGGTGCAGCTGCTTTTATAGCAGTTGGTGTGGTGGCTATTACTGTCTTAAACATCCATGTTCGCAATTCAATGGCTCGTTCGGCTGCTCAGTTTGCATTCTCTGGAGGTGAGGACTATAGTGGCTCGCCCGAGGATGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCAGATGGAGCTCATAATCTTCTTAACAAAGACAGTGAAATTGGCCGTGGAGGATTCGGAGTTGTTTATCGCACTGTCCTTAGAGACGGTCATTCTGTTGCAATCAAGAAGCTTACAGTGTCCAGTTTGATCAAGTCCCAAGAGGACTTTGAGAGGGAAGTGAAGAATCTAGGCAAGGTTAGGCACCAAAACCTCGCGAAACTCGAAGGCTATTACTGGACTTCATCCTTGCAGCTTCTCATTTATGAGTACTTATCCAAAGGGAGTCTGCATAAGCTCCTACATGATAATGATAGCAGCAAAGATGTCTTCTCATGGAGGCAAAGATTCCGGATTATTCTCGGCATGGCGAAAGGGCTAGCTCATTTGCACCAGATGGACATTATACATTACAATCTTAAGTCAACAAATGTTCTGATTGATTGTTCGGGCGAGGCGAAAATAGGAGACTATGGCCTAGTGAAGCTATTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCATTAGGCTACATGGCTCCGGAGTTTGCTTGCCGAACGGTTAAGATAACCGAGAAATGTGATGTGTATGGCTTTGGAGTGCTTGTTCTTGAGGTGGTGACAGGAAGAAGGCCTGTGGAATACATGGAGGATGATGTGGTGGTTCTTTGTGACATGGTGAGGGGTGCATTGGAGGAAGGCAAGGTTGAGCAATGTGTTGATGGTACGTTGCTTGGTAATTTCGTGGCCGAAGAGGCGATTCCGGTGATCAAATTAGGGTTGATCTGTGCATCTCAAGTTCCGTCGAACCGGCCGGATATGGCCGAGGTAATCAACATTCTAGAGTTAATCCAATGCCCTTCAGAAGGACAAGAGGAGTTAGAATGA 2889 0.433 MNIDHTHSVKMKMKMQLCCIFQLLFLIPVLSGGGDDTSFNDDVLGLIVFKAGLDDPKGKLSSWNEDDFTPCNWNGVDCDHSTKRVNSLVLDGFSLSGHIDRGLLRLQNLRILSLARNNFTGTINPDLASSLAGLQVVDFSDNNLSGSIPEGFFNQCASLRTVSFAKNNLTGKVPDSLSSCSTLVNVNFSYNQISGILPSGVWFLRAIQSFDLSNNLLEGEIPEGIHNLYDLRELNLQNNHFSGKIPEEIGGCLVLKSLDLSGNFLSGELPESMQRLSSCTSLSLQRNSLAGTVPDWIGGLRSLEILDLSANGFSGWIPKSLGNLDSLVRLNLSRNRFTRNVPDLMANCTKLTSFDISHNEFSGQFPWWMFIMGLQGSPFHGLQVLDLSSNAFSGELPYGIGNLSSLQVLNVSANDISGSIPVTIGELKSLYILDMSYNNLNGSIASEIQGASSLTELRLQSNFLSGGIPTEIDKCSAITSLILSHNKLTGSIPASIANLNNLQYVDLSWNELSGGLPKELTNLLHLLDFNVSYNHLQGELPVGGFFNTISPSSVSGNSLLCGSVVNQSCPSDHPKPIVLNPNSSSSNSSISAQNRHHKIILSISALIAIGAAAFIAVGVVAITVLNIHVRNSMARSAAQFAFSGGEDYSGSPEDDPNYGKLVMFSGDADFADGAHNLLNKDSEIGRGGFGVVYRTVLRDGHSVAIKKLTVSSLIKSQEDFEREVKNLGKVRHQNLAKLEGYYWTSSLQLLIYEYLSKGSLHKLLHDNDSSKDVFSWRQRFRIILGMAKGLAHLHQMDIIHYNLKSTNVLIDCSGEAKIGDYGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGRRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDGTLLGNFVAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEELE 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc203g00001 962 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 672 754 - -
Stsc203g00001 962 Gene3D Ribonuclease Inhibitor 40 203 IPR032675 -
Stsc203g00001 962 ProSiteProfiles Protein kinase domain profile. 678 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc203g00001 962 SUPERFAMILY L domain-like 57 367 - -
Stsc203g00001 962 Gene3D Ribonuclease Inhibitor 281 572 IPR032675 -
Stsc203g00001 962 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Stsc203g00001 962 Gene3D Ribonuclease Inhibitor 204 277 IPR032675 -
Stsc203g00001 962 SUPERFAMILY Protein kinase-like (PK-like) 679 952 IPR011009 -
Stsc203g00001 962 FunFam Inactive leucine-rich repeat receptor-like protein kinase 199 295 - -
Stsc203g00001 962 Gene3D Phosphorylase Kinase; domain 1 667 754 - -
Stsc203g00001 962 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 40 948 - -
Stsc203g00001 962 SMART LRR_typ_2 204 227 IPR003591 -
Stsc203g00001 962 SMART LRR_typ_2 228 252 IPR003591 -
Stsc203g00001 962 SMART LRR_typ_2 324 348 IPR003591 -
Stsc203g00001 962 SMART LRR_typ_2 499 523 IPR003591 -
Stsc203g00001 962 SMART LRR_typ_2 131 155 IPR003591 -
Stsc203g00001 962 SMART LRR_typ_2 106 130 IPR003591 -
Stsc203g00001 962 SMART LRR_typ_2 300 323 IPR003591 -
Stsc203g00001 962 SMART LRR_typ_2 403 427 IPR003591 -
Stsc203g00001 962 FunFam LRR receptor-like serine/threonine-protein kinase 298 372 - -
Stsc203g00001 962 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 755 957 - -
Stsc203g00001 962 Pfam Protein kinase domain 679 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc203g00001 962 FunFam Leucine-rich repeat receptor-like protein kinase 39 198 - -
Stsc203g00001 962 ProSitePatterns Protein kinases ATP-binding region signature. 684 707 IPR017441 GO:0005524
Stsc203g00001 962 Pfam Leucine rich repeat 453 512 IPR001611 GO:0005515
Stsc203g00001 962 Pfam Leucine rich repeat 255 312 IPR001611 GO:0005515
Stsc203g00001 962 Gene3D Transferase(Phosphotransferase) domain 1 755 955 - -
Stsc203g00001 962 FunFam Leucine-rich repeat receptor-like protein kinase PXC2 373 572 - -
Stsc203g00001 962 Pfam Leucine Rich Repeat 231 252 IPR001611 GO:0005515
Stsc203g00001 962 SUPERFAMILY RNI-like 297 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc203g00001 Stsc-Chr203 221 3819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc203g00001 15 961 Receptor kinase-like Gene Family AT3G56370 61.082 0.0 1112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Stsc203g00001 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc203g00001 - - gmx:100813535 1488.4