Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc202g00010 ATGATTGAAATTGAGACGACACTCCCTCTCGTCTATACCCTTACAGCTATGATTTCCGTGTATTTACTATGGTTTCATCTTTTCTCTCGGATCCTAACCGGTCCGAGAGTATATCCTTTCTTGGGAAGCCTTCCGATTCTTTTTATGAATCGAAATCGGGTTCATGATTGGATTACTGTAAATTTGATCGATCGAACCAAAGTTTCTGGTTCGGCCACATACCAGACTTGCATCCTCCCTTTTCCTTTCTTAGCACGTAAGCAAGGGTTTTACACAGTCACGTCCAATCCCAAGAACATCGAACACGTGCTCAAGATTCGATTTGATAATTACCCAAAAGGGCCCAACTGGCAAACGGCATTCCATGATCTCTTGGGCCAAGGGATCTTCAACAGCGATGGCGCCACGTGGCTGATTCAGCGAAAGACGGCGGCGTTGGAGTTCACGACGCGAACCCTAAAGCATGCCATGGGCCGATGGGTGAACCGTACAATCAAGAACCGTTTGTGGTGCATCTTGGATAAAGCAGCAAAGGAGGGTGTACCGGTGGACCTTCAGGACCTTCTTTTAAGATTGACTTTTGATAACATTTGTGGACTAACTTTTGGGAAAGACCCAGAAACTTTGTCACCGGATTTGCCTGAAAACCCTTTTTCCAATTCTTTTGATTCTGCAACTGAAGCTACATTGCATAGGCTTTTGTATTACCCTGGGATCTTGTGGAGGTTCAAGAAGCTTCTATGCATTGGTTCGGAAAAGAGGCTCAAGGAGAGTTTGAAGGTCGTTGATGATTACATGAACGTCGTCGTTTCCAATCGCGACAAGTCATCCTCCGACGACCTAATCTCCCGCTTCACCAAGAAGCGTGACGGCGACGGCAACCTCTTCTCCACCGCCGCACTCCAACGCATCGCCCTCAACTTCGTCCTCGCCGGCAGGGACACCTCCTCCGTCGCCCTCTCCTGGTTCTTCTACCTCGTCTCCTCCCACCCTCACGTCGAAGATCGCATCCTCCACGAACTCACGGAGGTCCTCTCCGCCTCCCGCGGCCCAGATCCCCGTCGCTGGACGGAGGATGCGATTGACTTCGAGGAGGCAGAGAAGCTGGTTTACCTCAAAGCCGCACTCTCCGAAACGCTGCGTTTATACCCTTCTGTTCCCGAGGATTTTAAGTACGCACTAAACGACGACGTTTTACCAGATGGCACTTTCGTTCCGAAGGGTTCGACGGTTACTTATTCGATTTATTCTGTTGGGAGAATGAAGAGTGTTTGGGGTGAGGATTGCATGGAATTTAAACCGGAGCGTTGGATTTCGGTTCAGGATAATCTGGTTCAGTTCGAACCGCCAAAAGATGGGTTTAAGTTCGTTGCTTTTAATGCTGGACCGAGAACCTGCTTGGGCAAGGACTTGGCTTACCTTCAGATGAAATCTGTGGCTGCCGCTGTGCTTTTGAAGTACCGGATATTGCCGGTTCCCGGTCACAAGGTGGAGCAGAAGATGTCGCTTACGCTCTTCATGAAGAATGGGCTCCGTGTTTACTTGAAGCCACGTCAGCTCCAACCAGAGACTCCAACGTCTGCATAG 1587 0.4946 MIEIETTLPLVYTLTAMISVYLLWFHLFSRILTGPRVYPFLGSLPILFMNRNRVHDWITVNLIDRTKVSGSATYQTCILPFPFLARKQGFYTVTSNPKNIEHVLKIRFDNYPKGPNWQTAFHDLLGQGIFNSDGATWLIQRKTAALEFTTRTLKHAMGRWVNRTIKNRLWCILDKAAKEGVPVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPENPFSNSFDSATEATLHRLLYYPGILWRFKKLLCIGSEKRLKESLKVVDDYMNVVVSNRDKSSSDDLISRFTKKRDGDGNLFSTAALQRIALNFVLAGRDTSSVALSWFFYLVSSHPHVEDRILHELTEVLSASRGPDPRRWTEDAIDFEEAEKLVYLKAALSETLRLYPSVPEDFKYALNDDVLPDGTFVPKGSTVTYSIYSVGRMKSVWGEDCMEFKPERWISVQDNLVQFEPPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLKYRILPVPGHKVEQKMSLTLFMKNGLRVYLKPRQLQPETPTSA 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc202g00010 528 Pfam Cytochrome P450 92 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 SUPERFAMILY Cytochrome P450 26 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 Gene3D Cytochrome P450 31 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 FunFam Cytochrome P450 26 521 - -
Stsc202g00010 528 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc202g00010 528 PANTHER CYTOCHROME P450 26 512 - -
Stsc202g00010 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Stsc202g00010 528 CDD CYP86A 75 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc202g00010 Stsc-Chr202 63430 66289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc202g00010 16 518 Cytochrome P450 AT5G58860 70.775 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc202g00010 K15401 - gmx:100787559 808.135