Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc201g00009 ATGACATCTCAAAATTTATCGACCCAATTAAGAGCTCTTGTTGTAGATGACAACATTCTCAACAGAAAGATTCATGAGAGGATGTTGAATGGTTTGGGAGTGGAATGCATGGTTGTAGCAAATGGAAAAGAAGCTGTGGATGTTCATTTTTATGGTCAAAGCTTTGACCTCATTCTCATGGACAAGGATATGCCCATCATGAATGGCATTGAGGCAACAAAGGAACTTAGGTCAATGGGCATTAACAGCCTGATTGTTGGTGTGTCATCACGTTCAATGGAGGCAGAAATCAGAGAATTCATGGAAGCTGGCCTAAATGACTACCATGTGAAACCATTGACAACTCATAAGCTTGCTTCCATTATTCATAATATCAACCCTAACTATGCAACAAAATAA 399 0.391 MTSQNLSTQLRALVVDDNILNRKIHERMLNGLGVECMVVANGKEAVDVHFYGQSFDLILMDKDMPIMNGIEATKELRSMGINSLIVGVSSRSMEAEIREFMEAGLNDYHVKPLTTHKLASIIHNINPNYATK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc201g00009 132 CDD REC_hyHK_CKI1_RcsC-like 13 122 - -
Stsc201g00009 132 SUPERFAMILY CheY-like 9 125 IPR011006 -
Stsc201g00009 132 SMART REC_2 10 122 IPR001789 GO:0000160
Stsc201g00009 132 Pfam Response regulator receiver domain 13 122 IPR001789 GO:0000160
Stsc201g00009 132 ProSiteProfiles Response regulatory domain profile. 11 126 IPR001789 GO:0000160
Stsc201g00009 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 132 - -
Stsc201g00009 132 Gene3D - 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc201g00009 Stsc-Chr201 48086 49133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc201g00009 13 125 Response Regulator Gene Family AT3G04280 47.826 5.56e-29 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc201g00009 Response_reg 2.6e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc201g00009 - - adu:107491646 218.394