Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc200g00008 ATGGAGAGCCTCAAGAATCTAAAGAATATTTCCTTGTTCAGCAACCAATTCTCAGGAGTCATTCCTCAGAATTTGGGAATCAATAGCAGCTTGGTGAAGTTGGACTTCACAAATAACAAGTTCACTGAGAATGCATATGTAATAGTCCAGAGCAGAAAATCTGATGTGTACAGCTATGGGGTAGTTCTGCTTGAGTTACTGACCAGAAAGAGAGATGTTATTGAGGAGGAAAGAAAGGTGACCGGTTTAGTTAGTTGGGTAAGAACTTTCTGGTTGGAAACAGGCAAAGTTGAGGAGATTGTTGATCCAGACCTTGCAAATGCATTTCCAAATTCAGAAATTTTAGCAAGGCAAGTCACTAAGGTGCTTTTATTGGCATTAAGATGCACCGAGAGGAAGCCGCGTGGTAGACCAACCATGAAAGACATTTTTGCCTTCTATCAGCTAGACATATTCAAGTTGAATTCTGATGATGTGGATGTGGTTAATGAAGATGCTGATGATGTAGCACCAGAACCATACAGTGTTCCATTTGTGAGCACTAATCCAGCTTCTGACACTCAGAGTTACTCCAATCTGCATGGTGAAACTAGTGAGGCTGAAAAGCTGAGACACAAACAAATTTGCATCATATGTGGAGAATGA 645 0.4078 MESLKNLKNISLFSNQFSGVIPQNLGINSSLVKLDFTNNKFTENAYVIVQSRKSDVYSYGVVLLELLTRKRDVIEEERKVTGLVSWVRTFWLETGKVEEIVDPDLANAFPNSEILARQVTKVLLLALRCTERKPRGRPTMKDIFAFYQLDIFKLNSDDVDVVNEDADDVAPEPYSVPFVSTNPASDTQSYSNLHGETSEAEKLRHKQICIICGE 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc200g00008 214 SUPERFAMILY L domain-like 3 44 - -
Stsc200g00008 214 MobiDBLite consensus disorder prediction 173 197 - -
Stsc200g00008 214 Gene3D Ribonuclease Inhibitor 2 45 IPR032675 -
Stsc200g00008 214 Gene3D Transferase(Phosphotransferase) domain 1 46 149 - -
Stsc200g00008 214 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 51 145 - -
Stsc200g00008 214 SUPERFAMILY Protein kinase-like (PK-like) 50 146 IPR011009 -
Stsc200g00008 214 MobiDBLite consensus disorder prediction 178 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc200g00008 Stsc-Chr200 56466 57441 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc200g00008 1 65 Receptor kinase-like Gene Family AT1G73080 42.424 4.50e-07 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc200g00008 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc200g00008 - - adu:107496784 256.529