Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2009g00001 ATGGATGTTAATTCAAAACCACTTAGTTCACAAGACAATGTTGAAGACTACGTGATGAATAGTGCGAAAGAGAACGTGTGTTGTATTTGCGATTGTGGCGATAGTAGTAACAAGTGTGATTCTGTGACTGTGGATGATATTACAAACCAGACTTTTGAAACATCGGATGCAACCTATAATATTTATGTAACCTATACAAAATGCGTTGGCTTTAGAATTCACAAGGGTGATACGACACGCGAAAAAGATGGAATGCATCGCAGAAGGCGGTTCTTTTGCAATAGGGAAGGAAAAAGACCTAAGAAATTCATCTATAATCCTGATAGGAATAATCCTGATAGGAAGAGGGAGCATAAAGCTTTGACTCAAATTGGTTGTGAAACCATGCTTTCGGTGTACTTTAACACTAAATCTTCAATTTGA 423 0.3735 MDVNSKPLSSQDNVEDYVMNSAKENVCCICDCGDSSNKCDSVTVDDITNQTFETSDATYNIYVTYTKCVGFRIHKGDTTREKDGMHRRRRFFCNREGKRPKKFIYNPDRNNPDRKREHKALTQIGCETMLSVYFNTKSSI 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2009g00001 140 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 133 - -
Stsc2009g00001 140 Pfam FAR1 DNA-binding domain 61 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2009g00001 Stsc-Chr2009 5193 5615 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc2009g00001 FAR1 2.5e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2009g00001 - - aip:110265356 191.43